RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 TEX13AQ9BXU3 409 aaPredicted RBP8.73□□□□□ -1.01
TRPM1-206ENST00000558212 NUCKS1Q9H1E3 243 aaKnown RBP8.73□□□□□ -1.01
TRPM1-206ENST00000558212 PCDHGC4Q9Y5F7 938 aa8.73□□□□□ -1.01
TRPM1-206ENST00000558212 PNMA6FA0A0J9YX94 578 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 TRAF5O00463 557 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 EIF1AYO14602 144 aaKnown RBP8.72□□□□□ -1.01
TRPM1-206ENST00000558212 ATXN7O15265 892 aaPredicted RBP8.72□□□□□ -1.01
TRPM1-206ENST00000558212 NEFLP07196 543 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 EIF6P56537 245 aaKnown RBP8.72□□□□□ -1.01
TRPM1-206ENST00000558212 TNP2Q05952 138 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 ALG1LQ6GMV1 187 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 TMC4Q7Z404 712 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 NBPF5PQ86XG9 351 aaPredicted RBP8.72□□□□□ -1.01
TRPM1-206ENST00000558212 SYNE4Q8N205 404 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 SNX29Q8TEQ0 813 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
TRPM1-206ENST00000558212 SNED1Q8TER0 1413 aa8.71□□□□□ -1.01
TRPM1-206ENST00000558212 XYLBO75191 536 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 ITGA6P23229 1130 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 ALDH1B1P30837 517 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 EPS15P42566 896 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 SOX10P56693 466 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 DAB2P98082 770 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 CIAPIN1Q6FI81 312 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 OLFM4Q6UX06 510 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 ZNF438Q7Z4V0 828 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 ZNF837Q96EG3 531 aaPredicted RBP8.71□□□□□ -1.02
TRPM1-206ENST00000558212 CHRDQ9H2X0 955 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.02
TRPM1-206ENST00000558212 HEG1Q9ULI3 1381 aa8.71□□□□□ -1.02
TRPM1-206ENST00000558212 BNIP3LO60238 219 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 CPNE3O75131 537 aaKnown RBP8.7□□□□□ -1.02
TRPM1-206ENST00000558212 CELF2O95319 508 aaKnown RBP8.7□□□□□ -1.02
TRPM1-206ENST00000558212 MAPTP10636 758 aaKnown RBP8.7□□□□□ -1.02
TRPM1-206ENST00000558212 IL13P35225 146 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
TRPM1-206ENST00000558212 NOGQ13253 232 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 LDLRAD1Q5T700 205 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 RIPOR1Q6ZS17 1223 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 TTC16Q8NEE8 873 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 GCC1Q96CN9 775 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 ZNF496Q96IT1 587 aaPredicted RBP8.7□□□□□ -1.02
TRPM1-206ENST00000558212 DUSP9Q99956 384 aaKnown RBP8.7□□□□□ -1.02
TRPM1-206ENST00000558212 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 PARP2Q9UGN5 583 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 KCNH4Q9UQ05 1017 aa8.7□□□□□ -1.02
TRPM1-206ENST00000558212 COL4A5P29400 1685 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
TRPM1-206ENST00000558212 ZNF790Q6PG37 636 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 TPTE2Q6XPS3 522 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 ZFYVE28Q9HCC9 887 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 ADARB2Q9NS39 739 aaKnown RBP8.69□□□□□ -1.02
TRPM1-206ENST00000558212 SAGE1Q9NXZ1 904 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 ZNF652Q9Y2D9 606 aa8.69□□□□□ -1.02
TRPM1-206ENST00000558212 DCDC2BA2VCK2 349 aa8.68□□□□□ -1.02
TRPM1-206ENST00000558212 GNA15P30679 374 aa8.68□□□□□ -1.02
TRPM1-206ENST00000558212 ABI2Q9NYB9 513 aaPredicted RBP8.68□□□□□ -1.02
TRPM1-206ENST00000558212 SIPA1L3O60292 1781 aaPredicted RBP8.67□□□□□ -1.02
TRPM1-206ENST00000558212 A1BGP04217 495 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 TEFQ10587 303 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
TRPM1-206ENST00000558212 CRY2Q49AN0 593 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 FMNL2Q96PY5 1086 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 CDHR2Q9BYE9 1310 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 GPRC5DQ9NZD1 345 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 CNTN3Q9P232 1028 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 PGAP2Q9UHJ9 254 aa8.67□□□□□ -1.02
TRPM1-206ENST00000558212 ATXN7L1Q9ULK2 861 aaPredicted RBP8.67□□□□□ -1.02
TRPM1-206ENST00000558212 KHNYNO15037 678 aaKnown RBP8.66□□□□□ -1.02
TRPM1-206ENST00000558212 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
TRPM1-206ENST00000558212 CCINQ13939 588 aa8.66□□□□□ -1.02
TRPM1-206ENST00000558212 NIM1KQ8IY84 436 aa8.66□□□□□ -1.02
TRPM1-206ENST00000558212 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
TRPM1-206ENST00000558212 NANOS1Q8WY41 292 aaKnown RBP8.66□□□□□ -1.02
TRPM1-206ENST00000558212 CCDC74AQ96AQ1 378 aa8.66□□□□□ -1.02
TRPM1-206ENST00000558212 FRMD6Q96NE9 622 aa8.66□□□□□ -1.02
TRPM1-206ENST00000558212 GLIS2Q9BZE0 524 aaPredicted RBP8.66□□□□□ -1.02
TRPM1-206ENST00000558212 NIP7Q9Y221 180 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRPM1-206ENST00000558212 KIF7Q2M1P5 1343 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 PHACTR2O75167 634 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 HMOX1P09601 288 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 HUNKP57058 714 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 GRIN2CQ14957 1233 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 CDC37L1Q7L3B6 337 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 CTU1Q7Z7A3 348 aaKnown RBP8.65□□□□□ -1.02
TRPM1-206ENST00000558212 GALNT12Q8IXK2 581 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 OR13H1Q8NG92 308 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 ABHD17AQ96GS6 310 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 FAM161BQ96MY7 647 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 VPS33BQ9H267 617 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 ZNF408Q9H9D4 720 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 MARK1Q9P0L2 795 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 ZFATQ9P243 1243 aa8.65□□□□□ -1.02
TRPM1-206ENST00000558212 AKAP11Q9UKA4 1901 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms