RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CATSPERGQ6ZRH7 1159 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 GPR142Q7Z601 462 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 PLEKHH3Q7Z736 793 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 RHPN1Q8TCX5 695 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 KIAA1683Q9H0B3 1180 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 RABGAP1Q9Y3P9 1069 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 ALPK3Q96L96 1907 aa19.4■□□□□ 0.7
SCFD1-224ENST00000557713 SHMT1P34896 483 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 RGS2P41220 211 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 USP14P54578 494 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 CACNB2Q08289 660 aaPredicted RBP19.39■□□□□ 0.69
SCFD1-224ENST00000557713 RAB3GAP1Q15042 981 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 ZYXQ15942 572 aaKnown RBP19.39■□□□□ 0.69
SCFD1-224ENST00000557713 ABCB5Q2M3G0 1257 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 ACER1Q8TDN7 264 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 C11orf49Q9H6J7 331 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 IL1RAPL2Q9NP60 686 aa19.39■□□□□ 0.69
SCFD1-224ENST00000557713 ZKSCAN1P17029 563 aaPredicted RBP19.38■□□□□ 0.69
SCFD1-224ENST00000557713 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
SCFD1-224ENST00000557713 TTF1Q15361 905 aaPredicted RBP19.38■□□□□ 0.69
SCFD1-224ENST00000557713 CCL14Q16627 93 aa19.38■□□□□ 0.69
SCFD1-224ENST00000557713 HSP90AB4PQ58FF6 505 aa19.38■□□□□ 0.69
SCFD1-224ENST00000557713 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
SCFD1-224ENST00000557713 FEZ1Q99689 392 aa19.38■□□□□ 0.69
SCFD1-224ENST00000557713 GDF15Q99988 308 aa19.38■□□□□ 0.69
SCFD1-224ENST00000557713 MAGEB6P1A0A0J9YX57 407 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 GABPAQ06546 454 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 SLC9C2Q5TAH2 1124 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 LHX8Q68G74 356 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 LBX2Q6XYB7 198 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 C7orf61Q8IZ16 206 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
SCFD1-224ENST00000557713 SOX1O00570 391 aaPredicted RBP19.36■□□□□ 0.69
SCFD1-224ENST00000557713 PDE6AP16499 860 aa19.36■□□□□ 0.69
SCFD1-224ENST00000557713 VCAM1P19320 739 aa19.36■□□□□ 0.69
SCFD1-224ENST00000557713 CCND3P30281 292 aaPredicted RBP19.36■□□□□ 0.69
SCFD1-224ENST00000557713 BMP8BP34820 402 aa19.36■□□□□ 0.69
SCFD1-224ENST00000557713 MAP2K5Q13163 448 aa19.36■□□□□ 0.69
SCFD1-224ENST00000557713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCFD1-224ENST00000557713 EDC3Q96F86 508 aaKnown RBP19.36■□□□□ 0.69
SCFD1-224ENST00000557713 APBA2Q99767 749 aa19.36■□□□□ 0.69
SCFD1-224ENST00000557713 DDX60LQ5H9U9 1706 aaKnown RBP19.36■□□□□ 0.69
SCFD1-224ENST00000557713 ZBED9Q6R2W3 1325 aa19.35■□□□□ 0.69
SCFD1-224ENST00000557713 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
SCFD1-224ENST00000557713 POLR3DP05423 398 aaPredicted RBP19.35■□□□□ 0.69
SCFD1-224ENST00000557713 COL6A1P12109 1028 aa19.35■□□□□ 0.69
SCFD1-224ENST00000557713 CCNA1P78396 465 aa19.35■□□□□ 0.69
SCFD1-224ENST00000557713 EVX2Q03828 476 aa19.35■□□□□ 0.69
SCFD1-224ENST00000557713 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
SCFD1-224ENST00000557713 CRNKL1Q9BZJ0 848 aaKnown RBP19.35■□□□□ 0.69
SCFD1-224ENST00000557713 BTBD7Q9P203 1132 aa19.35■□□□□ 0.69
SCFD1-224ENST00000557713 ZMYND8Q9ULU4 1186 aaPredicted RBP19.35■□□□□ 0.69
SCFD1-224ENST00000557713 PFASO15067 1338 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 ZNF532Q9HCE3 1301 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 SLC15A5A6NIM6 579 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 GLRX3O76003 335 aaKnown RBP19.34■□□□□ 0.69
SCFD1-224ENST00000557713 PTPREP23469 700 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 SEPT2Q15019 361 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 SIRT2Q8IXJ6 389 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 CLASRPQ8N2M8 674 aaKnown RBP19.34■□□□□ 0.69
SCFD1-224ENST00000557713 KIF1BPQ96EK5 621 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 MCM9Q9NXL9 1143 aa19.34■□□□□ 0.69
SCFD1-224ENST00000557713 A0A1W2PRG0 241 aa19.33■□□□□ 0.68
SCFD1-224ENST00000557713 SPDYE16A6NNV3 312 aaPredicted RBP19.33■□□□□ 0.68
SCFD1-224ENST00000557713 GOLIM4O00461 696 aa19.33■□□□□ 0.68
SCFD1-224ENST00000557713 MS4A1P11836 297 aa19.33■□□□□ 0.68
SCFD1-224ENST00000557713 RPAP3Q9H6T3 665 aaPredicted RBP19.33■□□□□ 0.68
SCFD1-224ENST00000557713 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.68
SCFD1-224ENST00000557713 FLRT1Q9NZU1 646 aa19.33■□□□□ 0.68
SCFD1-224ENST00000557713 APBB1O00213 710 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 HOXC6P09630 235 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 SYN1P17600 705 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 LCORLQ8N3X6 602 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 SDR42E1Q8WUS8 393 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 LRCH3Q96II8 777 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 DCP1AQ9NPI6 582 aaPredicted RBP19.32■□□□□ 0.68
SCFD1-224ENST00000557713 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
SCFD1-224ENST00000557713 IFIT2P09913 472 aaKnown RBP19.31■□□□□ 0.68
SCFD1-224ENST00000557713 GRB14Q14449 540 aa19.31■□□□□ 0.68
SCFD1-224ENST00000557713 DNAJC2Q99543 621 aaKnown RBP19.31■□□□□ 0.68
SCFD1-224ENST00000557713 MPHOSPH10O00566 681 aaKnown RBP19.3■□□□□ 0.68
SCFD1-224ENST00000557713 RAB11FIP3O75154 756 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 HMMRO75330 724 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 IGHA2P01877 340 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 CYP2D6P10635 497 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 COG2Q14746 738 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 WDR78Q5VTH9 848 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 MFSD14CQ5VZR4 134 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
SCFD1-224ENST00000557713 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 DDX19BQ9UMR2 479 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 NAV1Q8NEY1 1877 aa19.3■□□□□ 0.68
SCFD1-224ENST00000557713 MAGEA10P43363 369 aaPredicted RBP19.29■□□□□ 0.68
SCFD1-224ENST00000557713 LRRC26Q2I0M4 334 aa19.29■□□□□ 0.68
SCFD1-224ENST00000557713 SIAH1Q8IUQ4 282 aa19.29■□□□□ 0.68
SCFD1-224ENST00000557713 NPLOC4Q8TAT6 608 aa19.29■□□□□ 0.68
SCFD1-224ENST00000557713 ARMT1Q9H993 441 aa19.29■□□□□ 0.68
SCFD1-224ENST00000557713 SWAP70Q9UH65 585 aa19.29■□□□□ 0.68
SCFD1-224ENST00000557713 COG6Q9Y2V7 657 aa19.29■□□□□ 0.68
SCFD1-224ENST00000557713 IVNS1ABPQ9Y6Y0 642 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms