RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 TTC6Q86TZ1 520 aa20.82■□□□□ 0.92
NEDD1-210ENST00000557400 KIAA1683Q9H0B3 1180 aa20.82■□□□□ 0.92
NEDD1-210ENST00000557400 ANTXR1Q9H6X2 564 aa20.82■□□□□ 0.92
NEDD1-210ENST00000557400 CWC22Q9HCG8 908 aaKnown RBP20.82■□□□□ 0.92
NEDD1-210ENST00000557400 NDUFB9Q9Y6M9 179 aa20.82■□□□□ 0.92
NEDD1-210ENST00000557400 PFASO15067 1338 aa20.81■□□□□ 0.92
NEDD1-210ENST00000557400 CCNA1P78396 465 aa20.81■□□□□ 0.92
NEDD1-210ENST00000557400 RAB3GAP1Q15042 981 aa20.81■□□□□ 0.92
NEDD1-210ENST00000557400 CERKLQ49MI3 558 aaPredicted RBP20.81■□□□□ 0.92
NEDD1-210ENST00000557400 CEP85Q6P2H3 762 aa20.81■□□□□ 0.92
NEDD1-210ENST00000557400 ERC1Q8IUD2 1116 aa20.81■□□□□ 0.92
NEDD1-210ENST00000557400 PLXNB2O15031 1838 aa20.81■□□□□ 0.92
NEDD1-210ENST00000557400 GLRX3O76003 335 aaKnown RBP20.8■□□□□ 0.92
NEDD1-210ENST00000557400 SYN1P17600 705 aa20.8■□□□□ 0.92
NEDD1-210ENST00000557400 MAP2K5Q13163 448 aa20.8■□□□□ 0.92
NEDD1-210ENST00000557400 ABCB5Q2M3G0 1257 aa20.8■□□□□ 0.92
NEDD1-210ENST00000557400 AACSQ86V21 672 aa20.8■□□□□ 0.92
NEDD1-210ENST00000557400 LAMA3Q16787 3333 aa20.8■□□□□ 0.92
NEDD1-210ENST00000557400 FOCADQ5VW36 1801 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 CNMDO75829 334 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 COL6A1P12109 1028 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 VCAM1P19320 739 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 CCND3P30281 292 aaPredicted RBP20.79■□□□□ 0.92
NEDD1-210ENST00000557400 MAGEA10P43363 369 aaPredicted RBP20.79■□□□□ 0.92
NEDD1-210ENST00000557400 LHX8Q68G74 356 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 CATSPERGQ6ZRH7 1159 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 ACER1Q8TDN7 264 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 RIOK1Q9BRS2 568 aaKnown RBP20.79■□□□□ 0.92
NEDD1-210ENST00000557400 CABP5Q9NP86 173 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
NEDD1-210ENST00000557400 HNRNPUQ00839 825 aaKnown RBP eCLIP20.78■□□□□ 0.92
NEDD1-210ENST00000557400 LBX2Q6XYB7 198 aa20.78■□□□□ 0.92
NEDD1-210ENST00000557400 EDC3Q96F86 508 aaKnown RBP20.78■□□□□ 0.92
NEDD1-210ENST00000557400 SLC15A5A6NIM6 579 aa20.77■□□□□ 0.92
NEDD1-210ENST00000557400 SHMT1P34896 483 aa20.77■□□□□ 0.92
NEDD1-210ENST00000557400 PLCD1P51178 756 aa20.77■□□□□ 0.92
NEDD1-210ENST00000557400 WDR78Q5VTH9 848 aa20.77■□□□□ 0.92
NEDD1-210ENST00000557400 MFSD14CQ5VZR4 134 aa20.77■□□□□ 0.92
NEDD1-210ENST00000557400 DDX60LQ5H9U9 1706 aaKnown RBP20.77■□□□□ 0.92
NEDD1-210ENST00000557400 CDK5RAP2Q96SN8 1893 aa20.77■□□□□ 0.92
NEDD1-210ENST00000557400 ALPK3Q96L96 1907 aa20.76■□□□□ 0.91
NEDD1-210ENST00000557400 MAGEB6P1A0A0J9YX57 407 aa20.76■□□□□ 0.91
NEDD1-210ENST00000557400 POLR3DP05423 398 aaPredicted RBP20.76■□□□□ 0.91
NEDD1-210ENST00000557400 PTPREP23469 700 aa20.76■□□□□ 0.91
NEDD1-210ENST00000557400 TTF1Q15361 905 aaPredicted RBP20.76■□□□□ 0.91
NEDD1-210ENST00000557400 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
NEDD1-210ENST00000557400 GPR153Q6NV75 609 aa20.76■□□□□ 0.91
NEDD1-210ENST00000557400 RPAP3Q9H6T3 665 aaPredicted RBP20.76■□□□□ 0.91
NEDD1-210ENST00000557400 IVNS1ABPQ9Y6Y0 642 aa20.76■□□□□ 0.91
NEDD1-210ENST00000557400 SPDYE16A6NNV3 312 aaPredicted RBP20.75■□□□□ 0.91
NEDD1-210ENST00000557400 HOXC6P09630 235 aa20.75■□□□□ 0.91
NEDD1-210ENST00000557400 GABPAQ06546 454 aa20.75■□□□□ 0.91
NEDD1-210ENST00000557400 LRIT3Q3SXY7 679 aa20.75■□□□□ 0.91
NEDD1-210ENST00000557400 TDHQ8IZJ6 230 aa20.75■□□□□ 0.91
NEDD1-210ENST00000557400 CRNKL1Q9BZJ0 848 aaKnown RBP20.75■□□□□ 0.91
NEDD1-210ENST00000557400 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
NEDD1-210ENST00000557400 BTBD7Q9P203 1132 aa20.75■□□□□ 0.91
NEDD1-210ENST00000557400 PDE6AP16499 860 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 GUCY1A2P33402 732 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 GRB14Q14449 540 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 LRRC26Q2I0M4 334 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 SLC9C2Q5TAH2 1124 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 SLC17A8Q8NDX2 589 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 RHPN1Q8TCX5 695 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 UBE2OQ9C0C9 1292 aaKnown RBP20.74■□□□□ 0.91
NEDD1-210ENST00000557400 MCM9Q9NXL9 1143 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 FLRT1Q9NZU1 646 aa20.74■□□□□ 0.91
NEDD1-210ENST00000557400 SEPT2Q15019 361 aa20.73■□□□□ 0.91
NEDD1-210ENST00000557400 MYO5AQ9Y4I1 1855 aaKnown RBP20.73■□□□□ 0.91
NEDD1-210ENST00000557400 MSCO60682 206 aa20.72■□□□□ 0.91
NEDD1-210ENST00000557400 ATP2B2Q01814 1243 aa20.72■□□□□ 0.91
NEDD1-210ENST00000557400 PANK1Q8TE04 598 aa20.72■□□□□ 0.91
NEDD1-210ENST00000557400 DDX20Q9UHI6 824 aaKnown RBP20.72■□□□□ 0.91
NEDD1-210ENST00000557400 MPHOSPH10O00566 681 aaKnown RBP20.71■□□□□ 0.91
NEDD1-210ENST00000557400 CLASRPQ8N2M8 674 aaKnown RBP20.71■□□□□ 0.91
NEDD1-210ENST00000557400 DEFB123Q8N688 67 aa20.71■□□□□ 0.91
NEDD1-210ENST00000557400 NPLOC4Q8TAT6 608 aa20.71■□□□□ 0.91
NEDD1-210ENST00000557400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.71■□□□□ 0.91
NEDD1-210ENST00000557400 ZNF532Q9HCE3 1301 aa20.71■□□□□ 0.91
NEDD1-210ENST00000557400 A0A1W2PRG0 241 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 GOLIM4O00461 696 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 CYP2C19P33261 490 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 EVX2Q03828 476 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 COG2Q14746 738 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 LPAR1Q92633 364 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 KIF1BPQ96EK5 621 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 DNAJC2Q99543 621 aaKnown RBP20.7■□□□□ 0.9
NEDD1-210ENST00000557400 DCP1AQ9NPI6 582 aaPredicted RBP20.7■□□□□ 0.9
NEDD1-210ENST00000557400 HOXC10Q9NYD6 342 aa20.7■□□□□ 0.9
NEDD1-210ENST00000557400 MYH1P12882 1939 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 TCRBV5S4A2TA0A5A2 114 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 CNGA1P29973 690 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 TMEM179Q6ZVK1 233 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 LCORLQ8N3X6 602 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 SDR42E1Q8WUS8 393 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 MOV10L1Q9BXT6 1211 aaKnown RBP20.69■□□□□ 0.9
NEDD1-210ENST00000557400 TANGO6Q9C0B7 1094 aa20.69■□□□□ 0.9
NEDD1-210ENST00000557400 SENP6Q9GZR1 1112 aaPredicted RBP20.69■□□□□ 0.9
NEDD1-210ENST00000557400 IGHA2P01877 340 aa20.68■□□□□ 0.9
NEDD1-210ENST00000557400 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms