RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 TMEM179Q6ZVK1 233 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 APPBP2Q92624 585 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
XRCC3-216ENST00000556682 ADCY3O60266 1144 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 CYP2D6P10635 497 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 GNAT2P19087 354 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 EN2P19622 333 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-216ENST00000556682 MX1P20591 662 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 HDAC1Q13547 482 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-216ENST00000556682 IRF5Q13568 498 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 SEPT2Q15019 361 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
XRCC3-216ENST00000556682 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 GIMAP6Q6P9H5 292 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 STRBPQ96SI9 672 aaKnown RBP12.95□□□□□ -0.34
XRCC3-216ENST00000556682 ARPP21Q9UBL0 812 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-216ENST00000556682 MORF4L1Q9UBU8 362 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 GABRQQ9UN88 632 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
XRCC3-216ENST00000556682 MAPK4P31152 587 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 CDK8P49336 464 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 CCNA1P78396 465 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
XRCC3-216ENST00000556682 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 PHIPQ8WWQ0 1821 aa12.94□□□□□ -0.34
XRCC3-216ENST00000556682 SIPA1L1O43166 1804 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 CHGBP05060 677 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 APPP05067 770 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 CAPN2P17655 700 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 VCAM1P19320 739 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 CATSPERGQ6ZRH7 1159 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 OSBP2Q969R2 916 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 FSD1Q9BTV5 496 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 RNF208Q9H0X6 261 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
XRCC3-216ENST00000556682 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 MYH1P12882 1939 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
XRCC3-216ENST00000556682 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 GPAA1O43292 621 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 GJB1P08034 283 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 CCL5P13501 91 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 ERVK-24P63145 666 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 ICA1Q05084 483 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 MTFR1Q15390 333 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 SBK1Q52WX2 424 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 PI4K2BQ8TCG2 481 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 OTUD7AQ8TE49 926 aaPredicted RBP12.92□□□□□ -0.34
XRCC3-216ENST00000556682 SOCS4Q8WXH5 440 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 LPAR1Q92633 364 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
XRCC3-216ENST00000556682 KANSL2Q9H9L4 492 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 MKNK2Q9HBH9 465 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 HOXC10Q9NYD6 342 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 PTPRFP10586 1907 aa12.92□□□□□ -0.34
XRCC3-216ENST00000556682 ATAD5Q96QE3 1844 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 PATL2C9JE40 543 aaKnown RBP12.91□□□□□ -0.34
XRCC3-216ENST00000556682 INHAP05111 366 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 AKR1B1P15121 316 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 TDO2P48775 406 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 EVX2Q03828 476 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 COG2Q14746 738 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
XRCC3-216ENST00000556682 LBX2Q6XYB7 198 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
XRCC3-216ENST00000556682 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 TXNRD2Q9NNW7 524 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 GJD2Q9UKL4 321 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
XRCC3-216ENST00000556682 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
XRCC3-216ENST00000556682 ELNP15502 786 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 GJA8P48165 433 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 Q3C1V9 767 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 TANGO6Q9C0B7 1094 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 STAP2Q9UGK3 403 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
XRCC3-216ENST00000556682 M0R2C6 588 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 HMGCRP04035 888 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 XRCC5P13010 732 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms