RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 CBFA2T2O43439 604 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 SMC2O95347 1197 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 BMP15O95972 392 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 SKILP12757 684 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 XBP1P17861 261 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 NT5C2P49902 561 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 RPS8P62241 208 aaKnown RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 FANCCQ00597 558 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 MDM2Q00987 491 aaPredicted RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 MECOMQ03112 1051 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 SYCP1Q15431 976 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 PKN1Q16512 942 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 TPD52L1Q16890 204 aaPredicted RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 FAM98CQ17RN3 349 aaKnown RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 NT5DC1Q5TFE4 455 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 NYAP1Q6ZVC0 841 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 TMTC3Q6ZXV5 915 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 CATIPQ7Z7H3 387 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 ZNF710Q8N1W2 664 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 OXER1Q8TDS5 423 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 NSUN4Q96CB9 384 aaKnown RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 SHISA4Q96DD7 197 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 C16orf45Q96MC5 204 aaPredicted RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 PHF20Q9BVI0 1012 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 CRNKL1Q9BZJ0 848 aaKnown RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 HSD3B7Q9H2F3 369 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 IFNKQ9P0W0 207 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 ARPP21Q9UBL0 812 aaPredicted RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 HOOK1Q9UJC3 728 aaKnown RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 CEP131Q9UPN4 1083 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 SRPRBQ9Y5M8 271 aaKnown RBP6.19□□□□□ -1.42
GPHN-213ENST00000556501 FOCADQ5VW36 1801 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 LTBP1Q14766 1721 aa6.19□□□□□ -1.42
GPHN-213ENST00000556501 CYP2D7A0A087X1C5 515 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 WTIPA6NIX2 430 aaPredicted RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 TRIM75PA6NK02 468 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 USP27XA6NNY8 438 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 SMIM22K7EJ46 135 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 KIF2AO00139 706 aaPredicted RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 ACTN4O43707 911 aaKnown RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 PLEKHA8P1O95397 391 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 TNNT1P13805 278 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 SFPQP23246 707 aaKnown RBP eCLIP6.18□□□□□ -1.42
GPHN-213ENST00000556501 KLRK1P26718 216 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 GTF2E1P29083 439 aaPredicted RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 LMOD1P29536 600 aaPredicted RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 HIBADHP31937 336 aaKnown RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 KRT2P35908 639 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 AKAP17AQ02040 695 aaKnown RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 TROAPQ12815 778 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 NR5A1Q13285 461 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 MORC3Q14149 939 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 POSTNQ15063 836 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 LONRF3Q496Y0 759 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 SBK1Q52WX2 424 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 IFIT1BQ5T764 474 aaKnown RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 LHX8Q68G74 356 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 KANK3Q6NY19 840 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 ARMCX5Q6P1M9 558 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 CTR9Q6PD62 1173 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 OLFM4Q6UX06 510 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 TMC6Q7Z403 805 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 NBPF5PQ86XG9 351 aaPredicted RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 IQCA1Q86XH1 822 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 CCAR2Q8N163 923 aaKnown RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 TRIML1Q8N9V2 468 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 CNNM3Q8NE01 707 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 FBXO22Q8NEZ5 403 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 ANKRD7Q92527 254 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 TNFRSF25Q93038 417 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 NLRP3Q96P20 1036 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 SETDB2Q96T68 719 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 ZMYND15Q9H091 742 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 DCP1AQ9NPI6 582 aaPredicted RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 ATP8A2Q9NTI2 1148 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 AATFQ9NY61 560 aaKnown RBP eCLIP6.18□□□□□ -1.42
GPHN-213ENST00000556501 SRP68Q9UHB9 627 aaKnown RBP6.18□□□□□ -1.42
GPHN-213ENST00000556501 PAXBP1Q9Y5B6 917 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 PCDHA5Q9Y5H7 936 aa6.18□□□□□ -1.42
GPHN-213ENST00000556501 MYH1P12882 1939 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 QSER1Q2KHR3 1735 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 PSDA5PKW4 1024 aaPredicted RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 FAM205CA6NFA0 338 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 USP17L21D6R901 530 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 GNPATO15228 680 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 FOXN1O15353 648 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 NRDCO43847 1150 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 PRDM1O75626 825 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 ATP1A3P13637 1013 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 BMP6P22004 513 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 SARSP49591 514 aaKnown RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 GRIN1Q05586 938 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 PDE4BQ07343 736 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 NPY5RQ15761 445 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms