RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 USP17L24Q0WX57 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 SHROOM1Q2M3G4 852 aaPredicted RBP15.17■□□□□ 0.02
SNX6-207ENST00000556303 C12orf60Q5U649 245 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 TMEM179Q6ZVK1 233 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 FEZ1Q99689 392 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
SNX6-207ENST00000556303 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
SNX6-207ENST00000556303 MYH7P12883 1935 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 MAPK4P31152 587 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 GUCY1A2P33402 732 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 GJA8P48165 433 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 CEP290O15078 2479 aa15.16■□□□□ 0.02
SNX6-207ENST00000556303 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
SNX6-207ENST00000556303 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
SNX6-207ENST00000556303 GNAT2P19087 354 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SNX6-207ENST00000556303 MTFR1Q15390 333 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 APPBP2Q92624 585 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 STRBPQ96SI9 672 aaKnown RBP15.15■□□□□ 0.02
SNX6-207ENST00000556303 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
SNX6-207ENST00000556303 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 RBPJLQ9UBG7 517 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 GJD2Q9UKL4 321 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 SLC4A4Q9Y6R1 1079 aa15.15■□□□□ 0.02
SNX6-207ENST00000556303 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 USP17L21D6R901 530 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 RNF113AO15541 343 aaKnown RBP15.14■□□□□ 0.01
SNX6-207ENST00000556303 PRKAB2O43741 272 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
SNX6-207ENST00000556303 CCL5P13501 91 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 ERVK-9P63128 1117 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 ERVK-24P63145 666 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 CCNA1P78396 465 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
SNX6-207ENST00000556303 SEPT2Q15019 361 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 SBK1Q52WX2 424 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 C16orf86Q6ZW13 317 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 TRMT44Q8IYL2 757 aaKnown RBP15.14■□□□□ 0.01
SNX6-207ENST00000556303 ACER1Q8TDN7 264 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 LPAR1Q92633 364 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 SH2D4AQ9H788 454 aa15.14■□□□□ 0.01
SNX6-207ENST00000556303 ARPP21Q9UBL0 812 aaPredicted RBP15.14■□□□□ 0.01
SNX6-207ENST00000556303 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
SNX6-207ENST00000556303 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
SNX6-207ENST00000556303 VCAM1P19320 739 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 CDK8P49336 464 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 SLFNL1Q499Z3 407 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 CTR9Q6PD62 1173 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 TICAM2Q86XR7 235 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 NUDT12Q9BQG2 462 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 TXNRD2Q9NNW7 524 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 HOXC10Q9NYD6 342 aa15.13■□□□□ 0.01
SNX6-207ENST00000556303 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
SNX6-207ENST00000556303 HMGCRP04035 888 aa15.12■□□□□ 0.01
SNX6-207ENST00000556303 INHAP05111 366 aa15.12■□□□□ 0.01
SNX6-207ENST00000556303 CYP2D6P10635 497 aa15.12■□□□□ 0.01
SNX6-207ENST00000556303 Q3C1V9 767 aa15.12■□□□□ 0.01
SNX6-207ENST00000556303 CCAR1Q8IX12 1150 aaKnown RBP15.12■□□□□ 0.01
SNX6-207ENST00000556303 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
SNX6-207ENST00000556303 ARHGEF10LQ9HCE6 1279 aa15.12■□□□□ 0.01
SNX6-207ENST00000556303 PAK6Q9NQU5 681 aaPredicted RBP15.12■□□□□ 0.01
SNX6-207ENST00000556303 SGPL1O95470 568 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 ELNP15502 786 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 MX1P20591 662 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 COG2Q14746 738 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
SNX6-207ENST00000556303 PI4K2BQ8TCG2 481 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 DYNLL2Q96FJ2 89 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 CRBNQ96SW2 442 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 RPAP3Q9H6T3 665 aaPredicted RBP15.11■□□□□ 0.01
SNX6-207ENST00000556303 KANSL2Q9H9L4 492 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 ZNF287Q9HBT7 754 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
SNX6-207ENST00000556303 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
SNX6-207ENST00000556303 A0A1W2PRG0 241 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 GSG1L2A8MUP6 293 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
SNX6-207ENST00000556303 CHGBP05060 677 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 AKR1B1P15121 316 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 EVX2Q03828 476 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 ICA1Q05084 483 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 PLEKHH3Q7Z736 793 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 UBE2Q1Q7Z7E8 422 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 MB21D1Q8N884 522 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 SLC44A5Q8NCS7 719 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 U2AF1L4Q8WU68 220 aaKnown RBP15.1■□□□□ 0.01
SNX6-207ENST00000556303 USP6NLQ92738 828 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 UNC93B1Q9H1C4 597 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 RPTORQ8N122 1335 aa15.1■□□□□ 0.01
SNX6-207ENST00000556303 GPAA1O43292 621 aa15.09■□□□□ 0.01
SNX6-207ENST00000556303 CNMDO75829 334 aa15.09■□□□□ 0.01
SNX6-207ENST00000556303 RGS2P41220 211 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms