RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 EPB41L4BQ9H329 900 aa5.2□□□□□ -1.58
EFCAB11-210ENST00000556078 CAMTA1Q9Y6Y1 1673 aa5.2□□□□□ -1.58
EFCAB11-210ENST00000556078 CDK12Q9NYV4 1490 aaPredicted RBP5.2□□□□□ -1.58
EFCAB11-210ENST00000556078 COL16A1Q07092 1604 aaPredicted RBP5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 ITSN2Q9NZM3 1697 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 ETV2O00321 342 aaPredicted RBP5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 FAM13AO94988 1023 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 LINC00310P59036 64 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 AAMPQ13685 434 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 RNF214Q8ND24 703 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 CCDC120Q96HB5 630 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 IRF2BPLQ9H1B7 796 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 KCNK12Q9HB15 430 aa5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 DCP1AQ9NPI6 582 aaPredicted RBP5.19□□□□□ -1.58
EFCAB11-210ENST00000556078 IQGAP1P46940 1657 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 ZC3H13Q5T200 1668 aaKnown RBP5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 GSTP1P09211 210 aaKnown RBP5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 ERVK-24P63145 666 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 NPAS4Q8IUM7 802 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 HOMEZQ8IX15 550 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 SLC26A8Q96RN1 970 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 ZC3H12CQ9C0D7 883 aaKnown RBP5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 CARS2Q9HA77 564 aaKnown RBP5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 SSU72Q9NP77 194 aaKnown RBP5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 PRDM10Q9NQV6 1147 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 ZNF777Q9ULD5 760 aaPredicted RBP5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 NHSL1Q5SYE7 1610 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 CTTNBP2Q8WZ74 1663 aa5.18□□□□□ -1.58
EFCAB11-210ENST00000556078 REREQ9P2R6 1566 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 NPATQ14207 1427 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 GNAT3A8MTJ3 354 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 NFIXQ14938 502 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 ZC3H12AQ5D1E8 599 aaKnown RBP5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 PRPF40BQ6NWY9 871 aaKnown RBP5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 EHD4Q9H223 541 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 ABCB6Q9NP58 842 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 SEMA3GQ9NS98 782 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 AGLP35573 1532 aa5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 CDK13Q14004 1512 aaKnown RBP5.17□□□□□ -1.58
EFCAB11-210ENST00000556078 FAM135BQ49AJ0 1406 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 SCAPERQ9BY12 1400 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 SHPRHQ149N8 1683 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 NFKB2Q00653 900 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 FAAP100Q0VG06 881 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 MTMR3Q13615 1198 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 KCNN1Q92952 543 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 BORCS6Q96GS4 357 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 KDM5CP41229 1560 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 CARMIL1Q5VZK9 1371 aa5.16□□□□□ -1.58
EFCAB11-210ENST00000556078 BCL9LQ86UU0 1499 aa5.15□□□□□ -1.58
EFCAB11-210ENST00000556078 SUPT5HO00267 1087 aaKnown RBP5.15□□□□□ -1.59
EFCAB11-210ENST00000556078 PDZD3Q86UT5 571 aa5.15□□□□□ -1.59
EFCAB11-210ENST00000556078 CCDC87Q9NVE4 849 aa5.15□□□□□ -1.59
EFCAB11-210ENST00000556078 MAPK8IP1Q9UQF2 711 aa5.15□□□□□ -1.59
EFCAB11-210ENST00000556078 CNTNAP4Q9C0A0 1308 aa5.15□□□□□ -1.59
EFCAB11-210ENST00000556078 ZMYM3Q14202 1370 aa5.15□□□□□ -1.59
EFCAB11-210ENST00000556078 PLCH2O75038 1416 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 KIDINS220Q9ULH0 1771 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 SUV39H1O43463 412 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 EOMESO95936 686 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 NEFLP07196 543 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 SF3B2Q13435 895 aaKnown RBP5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 SKOR2Q2VWA4 1001 aaPredicted RBP5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 USPL1Q5W0Q7 1092 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 ZNF772Q68DY9 489 aaPredicted RBP5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 ABHD4Q8TB40 342 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 FOXQ1Q9C009 403 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 ATP13A1Q9HD20 1204 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 PRDM5Q9NQX1 630 aaPredicted RBP5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 DEPDC5O75140 1603 aa5.14□□□□□ -1.59
EFCAB11-210ENST00000556078 BRWD3Q6RI45 1802 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 A2ML1A8K2U0 1454 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 RAC2P15153 192 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 C22orf34Q6ZV56 151 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 HSPA12BQ96MM6 686 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 KCNC2Q96PR1 638 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 ABCC1P33527 1531 aa5.13□□□□□ -1.59
EFCAB11-210ENST00000556078 ADRB1P08588 477 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 NTF4P34130 210 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 ZNF157P51786 506 aaPredicted RBP5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 C1QTNF8P60827 252 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 FKBP4Q02790 459 aaKnown RBP eCLIP5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 PPP2R3AQ06190 1150 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 KCNB2Q92953 911 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 PBXIP1Q96AQ6 731 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 ALPK1Q96QP1 1244 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 RTEL1Q9NZ71 1219 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 JCADQ9P266 1359 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 NPHP4O75161 1426 aaPredicted RBP5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 MED14O60244 1454 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 MAP3K1Q13233 1512 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 DIP2AQ14689 1571 aa5.12□□□□□ -1.59
EFCAB11-210ENST00000556078 CHD4Q14839 1912 aa5.11□□□□□ -1.59
EFCAB11-210ENST00000556078 IGHA2P01877 340 aa5.11□□□□□ -1.59
EFCAB11-210ENST00000556078 THAP5Q7Z6K1 395 aa5.11□□□□□ -1.59
EFCAB11-210ENST00000556078 DEFB132Q7Z7B7 95 aa5.11□□□□□ -1.59
EFCAB11-210ENST00000556078 AFAP1Q8N556 730 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms