RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 GABPAQ06546 454 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 ITPRIPQ8IWB1 547 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 PAGR1Q9BTK6 254 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 FLRT1Q9NZU1 646 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 SERPINB13Q9UIV8 391 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
CHMP4BP1-201ENST00000556017 SYN1P17600 705 aa17.52■□□□□ 0.4
CHMP4BP1-201ENST00000556017 ZYXQ15942 572 aaKnown RBP17.52■□□□□ 0.4
CHMP4BP1-201ENST00000556017 LBX2Q6XYB7 198 aa17.52■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
CHMP4BP1-201ENST00000556017 KIAA1683Q9H0B3 1180 aa17.52■□□□□ 0.4
CHMP4BP1-201ENST00000556017 BTBD7Q9P203 1132 aa17.52■□□□□ 0.4
CHMP4BP1-201ENST00000556017 VCAM1P19320 739 aa17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 APBA2Q99767 749 aa17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 RABGAP1Q9Y3P9 1069 aa17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 BAZ2AQ9UIF9 1905 aaKnown RBP17.51■□□□□ 0.39
CHMP4BP1-201ENST00000556017 A0A1W2PRG0 241 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L15C9J2P7 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L13C9JLJ4 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L11C9JVI0 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L18D6R9N7 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L22D6RA61 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L17D6RBQ6 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L19D6RCP7 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L20D6RJB6 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 MAGEA10P43363 369 aaPredicted RBP17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP17L24Q0WX57 530 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 MAP2K5Q13163 448 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 PANK1Q8TE04 598 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 GTF3C2Q8WUA4 911 aaPredicted RBP17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 MYH8P13535 1937 aa17.5■□□□□ 0.39
CHMP4BP1-201ENST00000556017 TCRBV5S4A2TA0A5A2 114 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 RGS2P41220 211 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP5P45974 858 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 LRRC26Q2I0M4 334 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 ABCB5Q2M3G0 1257 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 KIAA1755Q5JYT7 1200 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 AACSQ86V21 672 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 HOXC6P09630 235 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 PDE6AP16499 860 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 PTPREP23469 700 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 MAP3K12Q12852 859 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 PDE3AQ14432 1141 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SEPT2Q15019 361 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 NPLOC4Q8TAT6 608 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 RHPN1Q8TCX5 695 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 ZNFX1Q9P2E3 1918 aaKnown RBP17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 UNC80Q8N2C7 3258 aa17.48■□□□□ 0.39
CHMP4BP1-201ENST00000556017 LTBP2Q14767 1821 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 GRB14Q14449 540 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SLFNL1Q499Z3 407 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 TMED8Q6PL24 325 aaPredicted RBP17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 TTC6Q86TZ1 520 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SIAH1Q8IUQ4 282 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 EDC3Q96F86 508 aaKnown RBP17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 RPAP3Q9H6T3 665 aaPredicted RBP17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 MYH7P12883 1935 aa17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SLC15A5A6NIM6 579 aa17.46■□□□□ 0.39
CHMP4BP1-201ENST00000556017 CYP2D6P10635 497 aa17.46■□□□□ 0.39
CHMP4BP1-201ENST00000556017 USP14P54578 494 aa17.46■□□□□ 0.39
CHMP4BP1-201ENST00000556017 SLC44A5Q8NCS7 719 aa17.46■□□□□ 0.39
CHMP4BP1-201ENST00000556017 FEZ1Q99689 392 aa17.46■□□□□ 0.39
CHMP4BP1-201ENST00000556017 MAGEB6P1A0A0J9YX57 407 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CHGBP05060 677 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 SLC9C2Q5TAH2 1124 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 GPR153Q6NV75 609 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 Q7L0L9 218 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 MIER1Q8N108 512 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 SDR42E1Q8WUS8 393 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 SMCHD1A6NHR9 2005 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CLEC10AQ8IUN9 316 aa17.44■□□□□ 0.38
CHMP4BP1-201ENST00000556017 TDHQ8IZJ6 230 aa17.44■□□□□ 0.38
CHMP4BP1-201ENST00000556017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHMP4BP1-201ENST00000556017 MOV10L1Q9BXT6 1211 aaKnown RBP17.44■□□□□ 0.38
CHMP4BP1-201ENST00000556017 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CYBAP13498 195 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms