RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CYP2B6P20813 491 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 ERVK-9P63128 1117 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 ERVK-24P63145 666 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 GABPAQ06546 454 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 SEPT2Q15019 361 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 ACER1Q8TDN7 264 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 SHISA4Q96DD7 197 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 DEFB118Q96PH6 123 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
SNX6-205ENST00000555648 SLC4A4Q9Y6R1 1079 aa18.57■□□□□ 0.56
SNX6-205ENST00000555648 PRKAB2O43741 272 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
SNX6-205ENST00000555648 CYP2D6P10635 497 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 VCAM1P19320 739 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 SLFNL1Q499Z3 407 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 WDR78Q5VTH9 848 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 TMEM179Q6ZVK1 233 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 TXNRD2Q9NNW7 524 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 RBPJLQ9UBG7 517 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 GJD2Q9UKL4 321 aa18.56■□□□□ 0.56
SNX6-205ENST00000555648 PTPRFP10586 1907 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 LRRFIP1Q32MZ4 808 aaKnown RBP18.55■□□□□ 0.56
SNX6-205ENST00000555648 CATSPERGQ6ZRH7 1159 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 TRMT44Q8IYL2 757 aaKnown RBP18.55■□□□□ 0.56
SNX6-205ENST00000555648 DYNLL2Q96FJ2 89 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 RPAP3Q9H6T3 665 aaPredicted RBP18.55■□□□□ 0.56
SNX6-205ENST00000555648 SH2D4AQ9H788 454 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
SNX6-205ENST00000555648 RABGAP1Q9Y3P9 1069 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 LOC285556D6RIA3 1793 aa18.55■□□□□ 0.56
SNX6-205ENST00000555648 RBBP6Q7Z6E9 1792 aaKnown RBP18.55■□□□□ 0.56
SNX6-205ENST00000555648 SIPA1L1O43166 1804 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 ATAD5Q96QE3 1844 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 USP17L12C9JPN9 530 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 USP17L21D6R901 530 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 PEX10O60683 326 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 PLEKHH3Q7Z736 793 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 SLC44A5Q8NCS7 719 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 CCDC17Q96LX7 622 aa18.54■□□□□ 0.56
SNX6-205ENST00000555648 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.54■□□□□ 0.562e-6■□□□□ 9
SNX6-205ENST00000555648 MYO5AQ9Y4I1 1855 aaKnown RBP18.54■□□□□ 0.56
SNX6-205ENST00000555648 RPTORQ8N122 1335 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 ZKSCAN1P17029 563 aaPredicted RBP18.53■□□□□ 0.56
SNX6-205ENST00000555648 GUCY1A2P33402 732 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 RGS2P41220 211 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 Q3C1V9 767 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 C12orf60Q5U649 245 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 GPR142Q7Z601 462 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 TANGO6Q9C0B7 1094 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 PAK6Q9NQU5 681 aaPredicted RBP18.53■□□□□ 0.56
SNX6-205ENST00000555648 IVNS1ABPQ9Y6Y0 642 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 FOCADQ5VW36 1801 aa18.53■□□□□ 0.56
SNX6-205ENST00000555648 ERC2O15083 957 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 XRCC5P13010 732 aaKnown RBP18.52■□□□□ 0.56
SNX6-205ENST00000555648 CDK8P49336 464 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 EVX2Q03828 476 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 ICA1Q05084 483 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 KBTBD3Q8NAB2 608 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 PUS7LQ9H0K6 701 aaKnown RBP18.52■□□□□ 0.56
SNX6-205ENST00000555648 PORCNQ9H237 461 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 HOXC10Q9NYD6 342 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 NR2E3Q9Y5X4 410 aa18.52■□□□□ 0.56
SNX6-205ENST00000555648 MYH1P12882 1939 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 H0YGN5 161 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 CHGBP05060 677 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 ZFYP08048 801 aaPredicted RBP18.51■□□□□ 0.55
SNX6-205ENST00000555648 AKR1B1P15121 316 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 ATP2B2Q01814 1243 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 COG2Q14746 738 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 TSHZ3Q63HK5 1081 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 LPAR1Q92633 364 aa18.51■□□□□ 0.55
SNX6-205ENST00000555648 ARPP21Q9UBL0 812 aaPredicted RBP18.51■□□□□ 0.55
SNX6-205ENST00000555648 CYP2D7A0A087X1C5 515 aa18.5■□□□□ 0.55
SNX6-205ENST00000555648 RNF113AO15541 343 aaKnown RBP18.5■□□□□ 0.55
SNX6-205ENST00000555648 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
SNX6-205ENST00000555648 HABP4Q5JVS0 413 aaKnown RBP18.5■□□□□ 0.55
SNX6-205ENST00000555648 TRIB2Q92519 343 aa18.5■□□□□ 0.55
SNX6-205ENST00000555648 APPBP2Q92624 585 aa18.5■□□□□ 0.55
SNX6-205ENST00000555648 APBA2Q99767 749 aa18.5■□□□□ 0.55
SNX6-205ENST00000555648 CDK5RAP2Q96SN8 1893 aa18.5■□□□□ 0.55
SNX6-205ENST00000555648 HTTP42858 3142 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 A0A1W2PRG0 241 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 SPDYE16A6NNV3 312 aaPredicted RBP18.49■□□□□ 0.55
SNX6-205ENST00000555648 APPP05067 770 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 PRKAR2AP13861 404 aaKnown RBP18.49■□□□□ 0.55
SNX6-205ENST00000555648 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
SNX6-205ENST00000555648 LBX2Q6XYB7 198 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 NECAB2Q7Z6G3 386 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 STRBPQ96SI9 672 aaKnown RBP18.49■□□□□ 0.55
SNX6-205ENST00000555648 MKNK2Q9HBH9 465 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 MGAMO43451 1857 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 TTC41PQ6P2S7 1318 aa18.49■□□□□ 0.55
SNX6-205ENST00000555648 SLC15A5A6NIM6 579 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 MINDY4BA8MYZ0 360 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 RAD21O60216 631 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms