RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 FGD4Q96M96 766 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MPHOSPH6Q99547 160 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 FERMT1Q9BQL6 677 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CTNND2Q9UQB3 1225 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 NUB1Q9Y5A7 615 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TNIKQ9UKE5 1360 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PALM3A6NDB9 673 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 EN1Q05925 392 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ASIC2Q16515 512 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PALM2Q8IXS6 379 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CSADQ9Y600 493 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CC2D2AQ9P2K1 1620 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 KIF15Q9NS87 1388 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MEIS1O00470 390 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 N4BP3O15049 544 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 BAG2O95816 211 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 YARSP54577 528 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CSE1LP55060 971 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PHEXP78562 749 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 EHHADHQ08426 723 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TRPC3Q13507 836 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 RPS6KA2Q15349 733 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ACCSLQ4AC99 568 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TRMT10CQ7L0Y3 403 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CLEC10AQ8IUN9 316 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ATP6V1E2Q96A05 226 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DPYSL4O14531 572 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 MAP3K12Q12852 859 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PI4KAP2A4QPH2 592 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TOP1P11387 765 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PI4KAP1Q8N8J0 262 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CDK13Q14004 1512 aaKnown RBP3.67□□□□□ -1.82
SYNE2-212ENST00000554584 hCG_2014768A0A024R1R8 64 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 GAS8O95995 478 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TMEM62Q0P6H9 643 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 ZSCAN30Q86W11 494 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 PPP1R14AQ96A00 147 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 CLIP2Q9UDT6 1046 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 LRCH1Q9Y2L9 728 aa3.67□□□□□ -1.82
SYNE2-212ENST00000554584 TSC22D2O75157 780 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ASMTLO95671 621 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 IGFBP4P22692 258 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 LRRC41Q15345 812 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 GIMAP6Q6P9H5 292 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 OGFOD1Q8N543 542 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 DDX12PQ92771 950 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 VPS37BQ9H9H4 285 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 GOLGA8SH3BPF8 625 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF213O14771 459 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SCAMP1O15126 338 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ZSCAN25Q6NSZ9 544 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SH2D3AQ9BRG2 576 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 NUF2Q9BZD4 464 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 AGTPBP1Q9UPW5 1226 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CFAP69A5D8W1 941 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 HDAC11Q96DB2 347 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 COG4Q9H9E3 785 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ZFYVE1Q9HBF4 777 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 KNL1Q8NG31 2342 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF394Q53GI3 561 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 KIAA1841Q6NSI8 718 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 GOLGA8IPA6NC78 632 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 GOLGA8JA6NMD2 632 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TNFAIP3P21580 790 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SLC8A3P57103 927 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 RNASELQ05823 741 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 VPS36Q86VN1 386 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TRMT44Q8IYL2 757 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TBC1D5Q92609 795 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ADAM33Q9BZ11 813 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 KRT82Q9NSB4 513 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 IPO11Q9UI26 975 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 H3BRB1 525 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 FXR1P51114 621 aaKnown RBP eCLIP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CEP85LQ5SZL2 805 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 MYO7AQ13402 2215 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TESPA1A2RU30 521 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CCT6AP40227 531 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SNX1Q13596 522 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PPP1R42Q7Z4L9 355 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CNNM3Q8NE01 707 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 BCL2L14Q9BZR8 327 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 GNAT3A8MTJ3 354 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CHRNA5P30532 468 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 STAT6P42226 847 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ZC4H2Q9NQZ6 224 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PAFAH1B1P43034 410 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PNMA8AQ86V59 439 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TEKT4Q8WW24 435 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 RNF19AQ9NV58 838 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 MROH2BQ7Z745 1585 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ATAD2BQ9ULI0 1458 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 DYNLT1P63172 113 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SNRNP48Q6IEG0 339 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 OSBPL10Q9BXB5 764 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 MAGEB6P1A0A0J9YX57 407 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PRAMEF22A3QJZ6 481 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 FAM47DPA6NHR8 397 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CTSHP09668 335 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms