RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SRRTQ9BXP5 876 aaKnown RBP8.12□□□□□ -1.11
SCFD1-211ENST00000554437 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-211ENST00000554437 RNF112Q9ULX5 631 aa8.12□□□□□ -1.11
SCFD1-211ENST00000554437 DNAJA1P31689 397 aaKnown RBP8.11□□□□□ -1.11
SCFD1-211ENST00000554437 GBP1P32455 592 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 GRIK1P39086 918 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 ARID5AQ03989 594 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 CDCP2Q5VXM1 449 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
SCFD1-211ENST00000554437 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 BAHD1Q8TBE0 780 aaPredicted RBP8.11□□□□□ -1.11
SCFD1-211ENST00000554437 HEXIM2Q96MH2 286 aaKnown RBP8.11□□□□□ -1.11
SCFD1-211ENST00000554437 CNNM2Q9H8M5 875 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 CEP131Q9UPN4 1083 aa8.11□□□□□ -1.11
SCFD1-211ENST00000554437 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 MEIS3P2A8K0S8 358 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 FOSL1P15407 271 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 ETV3P41162 512 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 EIF6P56537 245 aaKnown RBP8.1□□□□□ -1.11
SCFD1-211ENST00000554437 CHMP4BP1P59074 171 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 FAM214BQ7L5A3 538 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 SLC43A3Q8NBI5 491 aa8.1□□□□□ -1.11
SCFD1-211ENST00000554437 RGS13O14921 159 aa8.09□□□□□ -1.11
SCFD1-211ENST00000554437 COBLO75128 1261 aa8.09□□□□□ -1.11
SCFD1-211ENST00000554437 NME1P15531 152 aaKnown RBP8.09□□□□□ -1.11
SCFD1-211ENST00000554437 CYP7A1P22680 504 aa8.09□□□□□ -1.11
SCFD1-211ENST00000554437 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-211ENST00000554437 SFRP5Q5T4F7 317 aa8.09□□□□□ -1.11
SCFD1-211ENST00000554437 DNAJB8Q8NHS0 232 aa8.09□□□□□ -1.11
SCFD1-211ENST00000554437 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
SCFD1-211ENST00000554437 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.09□□□□□ -1.11
SCFD1-211ENST00000554437 CNTNAP4Q9C0A0 1308 aa8.08□□□□□ -1.12
SCFD1-211ENST00000554437 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
SCFD1-211ENST00000554437 IGF2BP3O00425 579 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCFD1-211ENST00000554437 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCFD1-211ENST00000554437 POLR2BP30876 1174 aaKnown RBP8.08□□□□□ -1.12
SCFD1-211ENST00000554437 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
SCFD1-211ENST00000554437 RBBP8NLQ8NC74 664 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-211ENST00000554437 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
SCFD1-211ENST00000554437 STRIP2Q9ULQ0 834 aa8.08□□□□□ -1.12
SCFD1-211ENST00000554437 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
SCFD1-211ENST00000554437 CBX7O95931 251 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 ITIH2P19823 946 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 SSTR4P31391 388 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 GIPRP48546 466 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 OXCT1P55809 520 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 RUFY4Q6ZNE9 571 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 LSRQ86X29 649 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-211ENST00000554437 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 SHDQ96IW2 340 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
SCFD1-211ENST00000554437 ZC3H7BQ9UGR2 993 aaKnown RBP8.07□□□□□ -1.12
SCFD1-211ENST00000554437 FAM86C2PA6NEL3 165 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 TNFRSF10CO14798 259 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 UBOX5O94941 541 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 INTS3Q68E01 1043 aaKnown RBP8.06□□□□□ -1.12
SCFD1-211ENST00000554437 OR6P1Q8NGX9 317 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 SLC9A7Q96T83 725 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 GOLGA2P5Q9HBQ8 144 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 U3KQE9 123 aa8.06□□□□□ -1.12
SCFD1-211ENST00000554437 PRR33A8MZF0 331 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-211ENST00000554437 CEACAM5P06731 702 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 GUCY2CP25092 1073 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 CCNFP41002 786 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
SCFD1-211ENST00000554437 NETO1Q8TDF5 533 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 COX4I2Q96KJ9 171 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 KREMEN1Q96MU8 473 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 GMLQ99445 158 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.05□□□□□ -1.12
SCFD1-211ENST00000554437 MKNK2Q9HBH9 465 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 MRVI1Q9Y6F6 885 aa8.05□□□□□ -1.12
SCFD1-211ENST00000554437 RBAK-RBAKDNI3L0D1 243 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 MED26O95402 600 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 FGRP09769 529 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 ACRP10323 421 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 ARTNQ5T4W7 220 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 MCF2L2Q86YR7 1114 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 MFSD4AQ8N468 514 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 TAB3Q8N5C8 712 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-211ENST00000554437 RNF141Q8WVD5 230 aa8.04□□□□□ -1.12
SCFD1-211ENST00000554437 CLEC3AO75596 197 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 KIR3DL1P43629 444 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 CD97P48960 835 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 PPP2R5EQ16537 467 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 UNC5AQ6ZN44 842 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 SLC6A18Q96N87 628 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 PLAGL2Q9UPG8 496 aa8.03□□□□□ -1.12
SCFD1-211ENST00000554437 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-211ENST00000554437 IFI16Q16666 785 aaKnown RBP8.02□□□□□ -1.13
SCFD1-211ENST00000554437 NKPD1Q17RQ9 610 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 TMEM192Q8IY95 271 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 FAM169BQ8N8A8 192 aa8.02□□□□□ -1.13
SCFD1-211ENST00000554437 DHRS1Q96LJ7 313 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms