RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 GRB14Q14449 540 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 SNX17Q15036 470 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 SHHQ15465 462 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 C9orf50Q5SZB4 431 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-206ENST00000554226 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-206ENST00000554226 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 TTYH1Q9H313 450 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-206ENST00000554226 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
NEDD1-206ENST00000554226 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
NEDD1-206ENST00000554226 A0A0G2JMZ2 1700 aa17.03■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L15C9J2P7 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L13C9JLJ4 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L11C9JVI0 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L18D6R9N7 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L22D6RA61 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L17D6RBQ6 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L19D6RCP7 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L20D6RJB6 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 GDF11O95390 407 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
NEDD1-206ENST00000554226 USP17L24Q0WX57 530 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 GORABQ5T7V8 394 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 MAPKAPK5Q8IW41 473 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
NEDD1-206ENST00000554226 CYBAP13498 195 aa17.01■□□□□ 0.31
NEDD1-206ENST00000554226 C1orf53Q5VUE5 145 aa17.01■□□□□ 0.31
NEDD1-206ENST00000554226 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
NEDD1-206ENST00000554226 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
NEDD1-206ENST00000554226 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
NEDD1-206ENST00000554226 EHD4Q9H223 541 aa17.01■□□□□ 0.31
NEDD1-206ENST00000554226 GPR108Q9NPR9 543 aa17.01■□□□□ 0.31
NEDD1-206ENST00000554226 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
NEDD1-206ENST00000554226 HLA-DOAP06340 250 aa17■□□□□ 0.31
NEDD1-206ENST00000554226 FOSL2P15408 326 aa17■□□□□ 0.31
NEDD1-206ENST00000554226 USP14P54578 494 aa17■□□□□ 0.31
NEDD1-206ENST00000554226 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
NEDD1-206ENST00000554226 ARRDC4Q8NCT1 418 aa17■□□□□ 0.31
NEDD1-206ENST00000554226 TRPV1Q8NER1 839 aa17■□□□□ 0.31
NEDD1-206ENST00000554226 GH2P01242 217 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 VCAM1P19320 739 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 COL9A1P20849 921 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 OLFML2BQ68BL8 750 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 CERS3Q8IU89 383 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
NEDD1-206ENST00000554226 ATP11BQ9Y2G3 1177 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 IVNS1ABPQ9Y6Y0 642 aa16.99■□□□□ 0.31
NEDD1-206ENST00000554226 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
NEDD1-206ENST00000554226 CYP2C19P33261 490 aa16.98■□□□□ 0.31
NEDD1-206ENST00000554226 SLC39A5Q6ZMH5 540 aa16.98■□□□□ 0.31
NEDD1-206ENST00000554226 NPLOC4Q8TAT6 608 aa16.98■□□□□ 0.31
NEDD1-206ENST00000554226 BADQ92934 168 aa16.98■□□□□ 0.31
NEDD1-206ENST00000554226 BTBD7Q9P203 1132 aa16.98■□□□□ 0.31
NEDD1-206ENST00000554226 SPDYE16A6NNV3 312 aaPredicted RBP16.97■□□□□ 0.31
NEDD1-206ENST00000554226 STRNO43815 780 aa16.97■□□□□ 0.31
NEDD1-206ENST00000554226 CNGA1P29973 690 aa16.97■□□□□ 0.31
NEDD1-206ENST00000554226 TMED8Q6PL24 325 aaPredicted RBP16.97■□□□□ 0.31
NEDD1-206ENST00000554226 CDCA7LQ96GN5 454 aa16.97■□□□□ 0.31
NEDD1-206ENST00000554226 FEZ1Q99689 392 aa16.97■□□□□ 0.31
NEDD1-206ENST00000554226 SERPINB13Q9UIV8 391 aa16.97■□□□□ 0.31
NEDD1-206ENST00000554226 SEPT4O43236 478 aa16.96■□□□□ 0.31
NEDD1-206ENST00000554226 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
NEDD1-206ENST00000554226 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.31
NEDD1-206ENST00000554226 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
NEDD1-206ENST00000554226 SHCBP1Q8NEM2 672 aa16.96■□□□□ 0.31
NEDD1-206ENST00000554226 PRDM5Q9NQX1 630 aaPredicted RBP16.96■□□□□ 0.31
NEDD1-206ENST00000554226 PDLIM7Q9NR12 457 aa16.96■□□□□ 0.31
NEDD1-206ENST00000554226 NDUFB9Q9Y6M9 179 aa16.96■□□□□ 0.31
NEDD1-206ENST00000554226 PARP14Q460N5 1801 aa16.96■□□□□ 0.3
NEDD1-206ENST00000554226 NCOR1O75376 2440 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 PNMA6EA0A0J9YXQ4 647 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 KBTBD13C9JR72 458 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 TNFRSF10AO00220 468 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 CCDC158Q5M9N0 1113 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
NEDD1-206ENST00000554226 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
NEDD1-206ENST00000554226 ROBO3Q96MS0 1386 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 GNAI2P04899 355 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 ABRAQ8N0Z2 381 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 USP38Q8NB14 1042 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
NEDD1-206ENST00000554226 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
NEDD1-206ENST00000554226 ADORA2AP29274 412 aa16.93■□□□□ 0.3
NEDD1-206ENST00000554226 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
NEDD1-206ENST00000554226 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
NEDD1-206ENST00000554226 ABCB5Q2M3G0 1257 aa16.93■□□□□ 0.3
NEDD1-206ENST00000554226 SH3RF1Q7Z6J0 888 aa16.93■□□□□ 0.3
NEDD1-206ENST00000554226 TTC6Q86TZ1 520 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms