RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 B4DLN1 442 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 AKR1B15C9JRZ8 316 aaPredicted RBP10.72□□□□□ -0.69
SIX4-202ENST00000554079 F6X3S4 739 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 HMOX1P09601 288 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 ATP4AP20648 1035 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 ZBED6P86452 979 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 RIPK1Q13546 671 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 BYSLQ13895 437 aaKnown RBP10.72□□□□□ -0.69
SIX4-202ENST00000554079 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 TSHZ1Q6ZSZ6 1077 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 SND1Q7KZF4 910 aaKnown RBP eCLIP10.72□□□□□ -0.69
SIX4-202ENST00000554079 CCDC170Q8IYT3 715 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 TSEN2Q8NCE0 465 aaKnown RBP10.72□□□□□ -0.69
SIX4-202ENST00000554079 CCDC97Q96F63 343 aaPredicted RBP10.72□□□□□ -0.69
SIX4-202ENST00000554079 ZFATQ9P243 1243 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 MROH1Q8NDA8 1641 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 JCADQ9P266 1359 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 OATP04181 439 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 ZNF18P17022 549 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 ALS2CLQ60I27 953 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 G2E3Q7L622 706 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 ACRBPQ8NEB7 543 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 CCHCR1Q8TD31 782 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 SIL1Q9H173 461 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 PICK1Q9NRD5 415 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 BAIAP2L1Q9UHR4 511 aa10.71□□□□□ -0.69
SIX4-202ENST00000554079 SH3TC1Q8TE82 1336 aa10.71□□□□□ -0.7
SIX4-202ENST00000554079 GHRP10912 638 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
SIX4-202ENST00000554079 APBA1Q02410 837 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 CCDC178Q5BJE1 867 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 CC2D2BQ6DHV5 1058 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 SLC4A10Q6U841 1118 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 LINC00301Q8NCQ3 95 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 MMADHCQ9H3L0 296 aaPredicted RBP10.7□□□□□ -0.7
SIX4-202ENST00000554079 SNRKQ9NRH2 765 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 NEXMIFQ5QGS0 1516 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 CYP27B1O15528 508 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 MAP3K13O43283 966 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 MDH1P40925 334 aaKnown RBP10.7□□□□□ -0.7
SIX4-202ENST00000554079 CTCFP49711 727 aaPredicted RBP10.7□□□□□ -0.7
SIX4-202ENST00000554079 FOSBP53539 338 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 NNTQ13423 1086 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 RRP12Q5JTH9 1297 aaKnown RBP10.7□□□□□ -0.7
SIX4-202ENST00000554079 PPP1R15BQ5SWA1 713 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 ARMCX6Q7L4S7 300 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 TRIM42Q8IWZ5 723 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 SSH3Q8TE77 659 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 RUBCNQ92622 972 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 P3H4Q92791 437 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 NDST4Q9H3R1 872 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 POLD4Q9HCU8 107 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 NOP53Q9NZM5 478 aaKnown RBP10.7□□□□□ -0.7
SIX4-202ENST00000554079 PHF8Q9UPP1 1060 aa10.7□□□□□ -0.7
SIX4-202ENST00000554079 MLH3Q9UHC1 1453 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 ATP7AQ04656 1500 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 KIF4AO95239 1232 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 ALADP13716 330 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 PFKFB1P16118 471 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 PDE4BQ07343 736 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 CUL3Q13618 768 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 GNPTABQ3T906 1256 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 LRRC23Q53EV4 343 aaPredicted RBP10.69□□□□□ -0.7
SIX4-202ENST00000554079 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 NSUN7Q8NE18 718 aaKnown RBP10.69□□□□□ -0.7
SIX4-202ENST00000554079 RHPN1Q8TCX5 695 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 ZIM3Q96PE6 472 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 TSPAN18Q96SJ8 248 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
SIX4-202ENST00000554079 YIPF2Q9BWQ6 316 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 ZCWPW1Q9H0M4 648 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 DNAAF2Q9NVR5 837 aaKnown RBP10.69□□□□□ -0.7
SIX4-202ENST00000554079 L3MBTL1Q9Y468 752 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 ASB3Q9Y575 518 aa10.69□□□□□ -0.7
SIX4-202ENST00000554079 C5orf60A6NFR6 353 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 PPIP5K2O43314 1243 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 NR1D1P20393 614 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 CKAP4Q07065 602 aaKnown RBP10.68□□□□□ -0.7
SIX4-202ENST00000554079 NR1I3Q14994 352 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 NUGGCQ68CJ6 796 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 MSL1Q68DK7 614 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 CCT6BQ92526 530 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 ARHGEF1Q92888 912 aaKnown RBP10.68□□□□□ -0.7
SIX4-202ENST00000554079 PIDD1Q9HB75 910 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.68□□□□□ -0.7
SIX4-202ENST00000554079 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 ANKARQ7Z5J8 1434 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 E7EVH7 732 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 PSMD14O00487 310 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 HSF2BPO75031 334 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 MFAP3LO75121 409 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 CTDNEP1O95476 244 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 YEATS4O95619 227 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 SCNN1BP51168 640 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms