RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 ZNF589Q86UQ0 364 aaPredicted RBP11.11□□□□□ -0.63
CHD8-206ENST00000553870 SLC44A5Q8NCS7 719 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 KIAA1683Q9H0B3 1180 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
CHD8-206ENST00000553870 BAZ2AQ9UIF9 1905 aaKnown RBP11.1□□□□□ -0.63
CHD8-206ENST00000553870 TLR2O60603 784 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 RASA1P20936 1047 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 OSBPP22059 807 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 EVX2Q03828 476 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 CRHR2Q13324 411 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 SEPT2Q15019 361 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 GADL1Q6ZQY3 521 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 PARK7Q99497 189 aaKnown RBP11.1□□□□□ -0.63
CHD8-206ENST00000553870 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.1□□□□□ -0.63
CHD8-206ENST00000553870 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
CHD8-206ENST00000553870 ZNF213O14771 459 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 SGSM2O43147 1006 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 ORC4O43929 436 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 FKTNO75072 461 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 AKR1B1P15121 316 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 HMGCS2P54868 508 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 MTMR2Q13614 643 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 ARHGEF6Q15052 776 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 CCDC84Q86UT8 332 aaPredicted RBP11.09□□□□□ -0.63
CHD8-206ENST00000553870 RNF41Q9H4P4 317 aaPredicted RBP11.09□□□□□ -0.63
CHD8-206ENST00000553870 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 SYNPO2Q9UMS6 1093 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
CHD8-206ENST00000553870 PHIPQ8WWQ0 1821 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 SMIM22K7EJ46 135 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 GCLCP48506 637 aaPredicted RBP11.08□□□□□ -0.64
CHD8-206ENST00000553870 SP3Q02447 781 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 ICA1Q05084 483 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
CHD8-206ENST00000553870 CASC1Q6TDU7 716 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 SIAH1Q8IUQ4 282 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
CHD8-206ENST00000553870 LPAR1Q92633 364 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 MKL1Q969V6 931 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 FEZ1Q99689 392 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 R3HDMLQ9H3Y0 253 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
CHD8-206ENST00000553870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHD8-206ENST00000553870 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
CHD8-206ENST00000553870 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
CHD8-206ENST00000553870 AKNAD1Q5T1N1 836 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 ACER1Q8TDN7 264 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 GTF3C2Q8WUA4 911 aaPredicted RBP11.07□□□□□ -0.64
CHD8-206ENST00000553870 STAG1Q8WVM7 1258 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 ERO1AQ96HE7 468 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHD8-206ENST00000553870 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
CHD8-206ENST00000553870 A0A1W2PRG0 241 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 TTLL1O95922 423 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 GNRH1P01148 92 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
CHD8-206ENST00000553870 TFAP4Q01664 338 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 KIF22Q14807 665 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 SMCR8Q8TEV9 937 aaPredicted RBP11.06□□□□□ -0.64
CHD8-206ENST00000553870 ASCC2Q9H1I8 757 aaPredicted RBP11.06□□□□□ -0.64
CHD8-206ENST00000553870 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 MTMR4Q9NYA4 1195 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 HOXC10Q9NYD6 342 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
CHD8-206ENST00000553870 ADGRA2Q96PE1 1338 aa11.06□□□□□ -0.64
CHD8-206ENST00000553870 PLIN4Q96Q06 1357 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 RANBP6O60518 1105 aaKnown RBP11.05□□□□□ -0.64
CHD8-206ENST00000553870 CDC45O75419 566 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 PRDM1O75626 825 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 CYP2C8P10632 490 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 BCRP11274 1271 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms