RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 CHMLP26374 656 aa14.15□□□□□ -0.14
TMEM253-202ENST00000553744 SEPT2Q15019 361 aa14.15□□□□□ -0.14
TMEM253-202ENST00000553744 STK11IPQ8N1F8 1099 aa14.15□□□□□ -0.14
TMEM253-202ENST00000553744 ZNF287Q9HBT7 754 aa14.15□□□□□ -0.14
TMEM253-202ENST00000553744 ZFYVE28Q9HCC9 887 aa14.15□□□□□ -0.14
TMEM253-202ENST00000553744 AGTPBP1Q9UPW5 1226 aa14.15□□□□□ -0.14
TMEM253-202ENST00000553744 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 GPR25O00155 361 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 FGAP02671 866 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 SLC3A2P08195 630 aaKnown RBP14.14□□□□□ -0.15
TMEM253-202ENST00000553744 RASA1P20936 1047 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 PDE4BQ07343 736 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 DGKZQ13574 1117 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 TREML2Q5T2D2 321 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 RUFY2Q8WXA3 655 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 IL25Q9H293 177 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 ANAPC4Q9UJX5 808 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 SLC45A1Q9Y2W3 748 aa14.14□□□□□ -0.15
TMEM253-202ENST00000553744 ICA1Q05084 483 aa14.13□□□□□ -0.15
TMEM253-202ENST00000553744 ACER1Q8TDN7 264 aa14.13□□□□□ -0.15
TMEM253-202ENST00000553744 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
TMEM253-202ENST00000553744 PARK7Q99497 189 aaKnown RBP14.13□□□□□ -0.15
TMEM253-202ENST00000553744 FEZ1Q99689 392 aa14.13□□□□□ -0.15
TMEM253-202ENST00000553744 DSCC1Q9BVC3 393 aa14.13□□□□□ -0.15
TMEM253-202ENST00000553744 KIAA1683Q9H0B3 1180 aa14.13□□□□□ -0.15
TMEM253-202ENST00000553744 TMOD4Q9NZQ9 345 aa14.13□□□□□ -0.15
TMEM253-202ENST00000553744 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
TMEM253-202ENST00000553744 TLR2O60603 784 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 PRDM1O75626 825 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 USP14P54578 494 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 USP17L2Q6R6M4 530 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 CLEC10AQ8IUN9 316 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 C12orf42Q96LP6 360 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM253-202ENST00000553744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM253-202ENST00000553744 ADGRA2Q96PE1 1338 aa14.12□□□□□ -0.15
TMEM253-202ENST00000553744 PLIN4Q96Q06 1357 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 A0A1W2PRG0 241 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 SGSM2O43147 1006 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 FKTNO75072 461 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 CYP2C8P10632 490 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 PABPC4Q13310 644 aaKnown RBP eCLIP14.11□□□□□ -0.15
TMEM253-202ENST00000553744 ZYXQ15942 572 aaKnown RBP14.11□□□□□ -0.15
TMEM253-202ENST00000553744 ZNF444Q8N0Y2 327 aaPredicted RBP14.11□□□□□ -0.15
TMEM253-202ENST00000553744 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 ARHGEF10LQ9HCE6 1279 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 LAMA4Q16363 1823 aa14.11□□□□□ -0.15
TMEM253-202ENST00000553744 FGRP09769 529 aa14.1□□□□□ -0.15
TMEM253-202ENST00000553744 HAND2P61296 217 aa14.1□□□□□ -0.15
TMEM253-202ENST00000553744 SIAH1Q8IUQ4 282 aa14.1□□□□□ -0.15
TMEM253-202ENST00000553744 SH2D4AQ9H788 454 aa14.1□□□□□ -0.15
TMEM253-202ENST00000553744 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
TMEM253-202ENST00000553744 TACC3Q9Y6A5 838 aa14.1□□□□□ -0.15
TMEM253-202ENST00000553744 IGKV6D-41A0A0C4DH26 115 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 ORC4O43929 436 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 EEF2P13639 858 aaKnown RBP14.09□□□□□ -0.15
TMEM253-202ENST00000553744 VCAM1P19320 739 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 OSBPP22059 807 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 HOXA7P31268 230 aaPredicted RBP14.09□□□□□ -0.15
TMEM253-202ENST00000553744 SP3Q02447 781 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 C17orf99Q6UX52 265 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 TBC1D10CQ8IV04 446 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
TMEM253-202ENST00000553744 MCOLN1Q9GZU1 580 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 NBPF3Q9H094 633 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
TMEM253-202ENST00000553744 INCENPQ9NQS7 918 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
TMEM253-202ENST00000553744 ZNF213O14771 459 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 BCRP11274 1271 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 PCP11498 1178 aaKnown RBP14.08□□□□□ -0.16
TMEM253-202ENST00000553744 IRX3P78415 501 aaPredicted RBP14.08□□□□□ -0.16
TMEM253-202ENST00000553744 TFAP4Q01664 338 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 ATP2B2Q01814 1243 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 NEDD1Q8NHV4 660 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 VCPKMTQ9H867 229 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 CPA4Q9UI42 421 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 CTNNA3Q9UI47 895 aa14.08□□□□□ -0.16
TMEM253-202ENST00000553744 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
TMEM253-202ENST00000553744 PTH1RQ03431 593 aa14.07□□□□□ -0.16
TMEM253-202ENST00000553744 IMMTQ16891 758 aaKnown RBP14.07□□□□□ -0.16
TMEM253-202ENST00000553744 CTU1Q7Z7A3 348 aaKnown RBP14.07□□□□□ -0.16
TMEM253-202ENST00000553744 CD99L2Q8TCZ2 262 aa14.07□□□□□ -0.16
TMEM253-202ENST00000553744 LPAR1Q92633 364 aa14.07□□□□□ -0.16
TMEM253-202ENST00000553744 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
TMEM253-202ENST00000553744 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
TMEM253-202ENST00000553744 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms