RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 HSPD1P10809 573 aaKnown RBP22■■□□□ 1.11
CPSF2-202ENST00000553427 USP14P54578 494 aa22■■□□□ 1.11
CPSF2-202ENST00000553427 PPARAQ07869 468 aa22■■□□□ 1.11
CPSF2-202ENST00000553427 TREML2Q5T2D2 321 aa22■■□□□ 1.11
CPSF2-202ENST00000553427 USP17L2Q6R6M4 530 aa22■■□□□ 1.11
CPSF2-202ENST00000553427 ANAPC4Q9UJX5 808 aa22■■□□□ 1.11
CPSF2-202ENST00000553427 PNMA3Q9UL41 463 aa22■■□□□ 1.11
CPSF2-202ENST00000553427 MPHOSPH10O00566 681 aaKnown RBP21.99■■□□□ 1.11
CPSF2-202ENST00000553427 RASA1P20936 1047 aa21.99■■□□□ 1.11
CPSF2-202ENST00000553427 SP3Q02447 781 aa21.99■■□□□ 1.11
CPSF2-202ENST00000553427 CWC27Q6UX04 472 aaKnown RBP21.99■■□□□ 1.11
CPSF2-202ENST00000553427 C17orf99Q6UX52 265 aa21.99■■□□□ 1.11
CPSF2-202ENST00000553427 CTU1Q7Z7A3 348 aaKnown RBP21.99■■□□□ 1.11
CPSF2-202ENST00000553427 ERO1AQ96HE7 468 aa21.99■■□□□ 1.11
CPSF2-202ENST00000553427 FEZ1Q99689 392 aa21.99■■□□□ 1.11
CPSF2-202ENST00000553427 RAD50Q92878 1312 aa21.99■■□□□ 1.11
CPSF2-202ENST00000553427 GREB1LQ9C091 1923 aaPredicted RBP21.98■■□□□ 1.11
CPSF2-202ENST00000553427 HOXA7P31268 230 aaPredicted RBP21.98■■□□□ 1.11
CPSF2-202ENST00000553427 PDE4BQ07343 736 aa21.98■■□□□ 1.11
CPSF2-202ENST00000553427 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
CPSF2-202ENST00000553427 ACER1Q8TDN7 264 aa21.98■■□□□ 1.11
CPSF2-202ENST00000553427 MKNK2Q9HBH9 465 aa21.98■■□□□ 1.11
CPSF2-202ENST00000553427 EMILIN3Q9NT22 766 aa21.98■■□□□ 1.11
CPSF2-202ENST00000553427 PLIN4Q96Q06 1357 aa21.98■■□□□ 1.11
CPSF2-202ENST00000553427 FGAP02671 866 aa21.97■■□□□ 1.11
CPSF2-202ENST00000553427 ICA1Q05084 483 aa21.97■■□□□ 1.11
CPSF2-202ENST00000553427 KANSL2Q9H9L4 492 aa21.97■■□□□ 1.11
CPSF2-202ENST00000553427 CYP2C8P10632 490 aa21.96■■□□□ 1.11
CPSF2-202ENST00000553427 BCRP11274 1271 aa21.96■■□□□ 1.11
CPSF2-202ENST00000553427 DGKZQ13574 1117 aa21.96■■□□□ 1.11
CPSF2-202ENST00000553427 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.96■■□□□ 1.11
CPSF2-202ENST00000553427 SH2D4AQ9H788 454 aa21.96■■□□□ 1.11
CPSF2-202ENST00000553427 ARHGEF10LQ9HCE6 1279 aa21.96■■□□□ 1.11
CPSF2-202ENST00000553427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.96■■□□□ 1.11
CPSF2-202ENST00000553427 FGRP09769 529 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 OSBPP22059 807 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 CHMLP26374 656 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 PKN2Q16513 984 aaKnown RBP21.95■■□□□ 1.1
CPSF2-202ENST00000553427 SIAH1Q8IUQ4 282 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 RUFY2Q8WXA3 655 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 DSCC1Q9BVC3 393 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 TMX2Q9Y320 296 aa21.95■■□□□ 1.1
CPSF2-202ENST00000553427 IGKV6D-41A0A0C4DH26 115 aa21.94■■□□□ 1.1
CPSF2-202ENST00000553427 A0A1W2PRG0 241 aa21.94■■□□□ 1.1
CPSF2-202ENST00000553427 BMP2KLQ5H9B9 411 aa21.94■■□□□ 1.1
CPSF2-202ENST00000553427 ZNF444Q8N0Y2 327 aaPredicted RBP21.94■■□□□ 1.1
CPSF2-202ENST00000553427 SMCR8Q8TEV9 937 aaPredicted RBP21.94■■□□□ 1.1
CPSF2-202ENST00000553427 ASCC2Q9H1I8 757 aaPredicted RBP21.94■■□□□ 1.1
CPSF2-202ENST00000553427 ORC4O43929 436 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 PCP11498 1178 aaKnown RBP21.93■■□□□ 1.1
CPSF2-202ENST00000553427 VCAM1P19320 739 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 GCLCP48506 637 aaPredicted RBP21.93■■□□□ 1.1
CPSF2-202ENST00000553427 ARHGEF6Q15052 776 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 CD99L2Q8TCZ2 262 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 LPAR1Q92633 364 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 MCOLN1Q9GZU1 580 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 CPA4Q9UI42 421 aa21.93■■□□□ 1.1
CPSF2-202ENST00000553427 PRDM1O75626 825 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 IRX3P78415 501 aaPredicted RBP21.92■■□□□ 1.1
CPSF2-202ENST00000553427 LACTBP83111 547 aaPredicted RBP21.92■■□□□ 1.1
CPSF2-202ENST00000553427 CLEC10AQ8IUN9 316 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 STK11IPQ8N1F8 1099 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 NEDD1Q8NHV4 660 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 GTF3C2Q8WUA4 911 aaPredicted RBP21.92■■□□□ 1.1
CPSF2-202ENST00000553427 IL25Q9H293 177 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 NYAP2Q9P242 653 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 SYNPO2Q9UMS6 1093 aa21.92■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L15C9J2P7 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L13C9JLJ4 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L11C9JVI0 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L18D6R9N7 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L22D6RA61 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L17D6RBQ6 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L19D6RCP7 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L20D6RJB6 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 EEF2P13639 858 aaKnown RBP21.91■■□□□ 1.1
CPSF2-202ENST00000553427 NT5C2P49902 561 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 USP17L24Q0WX57 530 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 ZYXQ15942 572 aaKnown RBP21.91■■□□□ 1.1
CPSF2-202ENST00000553427 FAM110CQ1W6H9 321 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 OTOP1Q7RTM1 612 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 VCPKMTQ9H867 229 aa21.91■■□□□ 1.1
CPSF2-202ENST00000553427 LAMA4Q16363 1823 aa21.9■■□□□ 1.1
CPSF2-202ENST00000553427 GNRH1P01148 92 aa21.9■■□□□ 1.1
CPSF2-202ENST00000553427 CTDSPL2Q05D32 466 aa21.9■■□□□ 1.1
CPSF2-202ENST00000553427 KIF22Q14807 665 aa21.9■■□□□ 1.1
CPSF2-202ENST00000553427 PPP4R3BQ5MIZ7 849 aa21.9■■□□□ 1.1
CPSF2-202ENST00000553427 EFCC1Q9HA90 598 aa21.9■■□□□ 1.1
CPSF2-202ENST00000553427 SGSM2O43147 1006 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 TSPY3P0CV98 308 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 TSPY8P0CW00 308 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 HERVK_113P62684 666 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 CAP1Q01518 475 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 FBXO46Q6PJ61 603 aaPredicted RBP21.89■■□□□ 1.09
CPSF2-202ENST00000553427 CATSPERGQ6ZRH7 1159 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 STAG1Q8WVM7 1258 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 NBPF3Q9H094 633 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 MTMR4Q9NYA4 1195 aa21.89■■□□□ 1.09
CPSF2-202ENST00000553427 MORF4L1Q9UBU8 362 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms