RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 C11orf49Q9H6J7 331 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
CHD8-203ENST00000553283 CNMDO75829 334 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 GLRX3O76003 335 aaKnown RBP11.4□□□□□ -0.58
CHD8-203ENST00000553283 BMP8BP34820 402 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 PLCD1P51178 756 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 CCNA1P78396 465 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 TTF1Q15361 905 aaPredicted RBP11.4□□□□□ -0.58
CHD8-203ENST00000553283 ZYXQ15942 572 aaKnown RBP11.4□□□□□ -0.58
CHD8-203ENST00000553283 CCL14Q16627 93 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 HSP90AB4PQ58FF6 505 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 C7orf61Q8IZ16 206 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 GDF15Q99988 308 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 CABP5Q9NP86 173 aa11.4□□□□□ -0.58
CHD8-203ENST00000553283 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 MAGEB6P1A0A0J9YX57 407 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 SOX1O00570 391 aaPredicted RBP11.39□□□□□ -0.59
CHD8-203ENST00000553283 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
CHD8-203ENST00000553283 VCAM1P19320 739 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 GUCY1A2P33402 732 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 SHMT1P34896 483 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 SLC9C2Q5TAH2 1124 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 LHX8Q68G74 356 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 LBX2Q6XYB7 198 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 PANK1Q8TE04 598 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 EDC3Q96F86 508 aaKnown RBP11.39□□□□□ -0.59
CHD8-203ENST00000553283 APBA2Q99767 749 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 CWC22Q9HCG8 908 aaKnown RBP11.39□□□□□ -0.59
CHD8-203ENST00000553283 IL1RAPL2Q9NP60 686 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 ZMYND8Q9ULU4 1186 aaPredicted RBP11.39□□□□□ -0.59
CHD8-203ENST00000553283 SZT2Q5T011 3432 aa11.39□□□□□ -0.59
CHD8-203ENST00000553283 SLC15A5A6NIM6 579 aa11.38□□□□□ -0.59
CHD8-203ENST00000553283 COL6A1P12109 1028 aa11.38□□□□□ -0.59
CHD8-203ENST00000553283 PDE6AP16499 860 aa11.38□□□□□ -0.59
CHD8-203ENST00000553283 CCND3P30281 292 aaPredicted RBP11.38□□□□□ -0.59
CHD8-203ENST00000553283 GABPAQ06546 454 aa11.38□□□□□ -0.59
CHD8-203ENST00000553283 MIER1Q8N108 512 aa11.38□□□□□ -0.59
CHD8-203ENST00000553283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHD8-203ENST00000553283 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
CHD8-203ENST00000553283 PFASO15067 1338 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 MS4A1P11836 297 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 SYN1P17600 705 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 PTPREP23469 700 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 SEPT2Q15019 361 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 WDR78Q5VTH9 848 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 RPAP2Q8IXW5 612 aaPredicted RBP11.37□□□□□ -0.59
CHD8-203ENST00000553283 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
CHD8-203ENST00000553283 LRCH3Q96II8 777 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
CHD8-203ENST00000553283 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 BTBD7Q9P203 1132 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 MYO5AQ9Y4I1 1855 aaKnown RBP11.37□□□□□ -0.59
CHD8-203ENST00000553283 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
CHD8-203ENST00000553283 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
CHD8-203ENST00000553283 GOLIM4O00461 696 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 HOXC6P09630 235 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 IFIT2P09913 472 aaKnown RBP11.36□□□□□ -0.59
CHD8-203ENST00000553283 MAGEA10P43363 369 aaPredicted RBP11.36□□□□□ -0.59
CHD8-203ENST00000553283 ATP2B2Q01814 1243 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 COG2Q14746 738 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 DCP1AQ9NPI6 582 aaPredicted RBP11.36□□□□□ -0.59
CHD8-203ENST00000553283 HOXC10Q9NYD6 342 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 FLRT1Q9NZU1 646 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
CHD8-203ENST00000553283 APBB1O00213 710 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 MPHOSPH10O00566 681 aaKnown RBP11.35□□□□□ -0.59
CHD8-203ENST00000553283 RAB11FIP3O75154 756 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 HMMRO75330 724 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 EVX2Q03828 476 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 GRB14Q14449 540 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 LCORLQ8N3X6 602 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 SDR42E1Q8WUS8 393 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
CHD8-203ENST00000553283 MYH1P12882 1939 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 ZBED9Q6R2W3 1325 aa11.35□□□□□ -0.59
CHD8-203ENST00000553283 STRNO43815 780 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 MSCO60682 206 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 IGHA2P01877 340 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 CYP2D6P10635 497 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 LRRC26Q2I0M4 334 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 TDHQ8IZJ6 230 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
CHD8-203ENST00000553283 MOV10L1Q9BXT6 1211 aaKnown RBP11.34□□□□□ -0.59
CHD8-203ENST00000553283 UBE2OQ9C0C9 1292 aaKnown RBP11.34□□□□□ -0.59
CHD8-203ENST00000553283 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms