RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GPR142Q7Z601 462 aa13.92□□□□□ -0.18
NEK3-204ENST00000552973 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
NEK3-204ENST00000552973 RPAP2Q8IXW5 612 aaPredicted RBP13.92□□□□□ -0.18
NEK3-204ENST00000552973 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
NEK3-204ENST00000552973 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
NEK3-204ENST00000552973 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
NEK3-204ENST00000552973 MCM9Q9NXL9 1143 aa13.92□□□□□ -0.18
NEK3-204ENST00000552973 SIPA1L1O43166 1804 aa13.92□□□□□ -0.18
NEK3-204ENST00000552973 MPHOSPH10O00566 681 aaKnown RBP13.91□□□□□ -0.18
NEK3-204ENST00000552973 CNMDO75829 334 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 CYP2D6P10635 497 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 GUCY1A2P33402 732 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 SEPT2Q15019 361 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 WDR78Q5VTH9 848 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 CATSPERGQ6ZRH7 1159 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 LCORLQ8N3X6 602 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 SOCS4Q8WXH5 440 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 C12orf42Q96LP6 360 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
NEK3-204ENST00000552973 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 MGAMO43451 1857 aa13.91□□□□□ -0.18
NEK3-204ENST00000552973 HMMRO75330 724 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 CHGBP05060 677 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
NEK3-204ENST00000552973 VCAM1P19320 739 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 RGS2P41220 211 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
NEK3-204ENST00000552973 USP14P54578 494 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 CACNB2Q08289 660 aaPredicted RBP13.9□□□□□ -0.18
NEK3-204ENST00000552973 MORN1Q5T089 497 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 C7orf61Q8IZ16 206 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
NEK3-204ENST00000552973 USP6NLQ92738 828 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 DYNLL2Q96FJ2 89 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 ZMYND8Q9ULU4 1186 aaPredicted RBP13.9□□□□□ -0.18
NEK3-204ENST00000552973 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 LOC285556D6RIA3 1793 aa13.9□□□□□ -0.18
NEK3-204ENST00000552973 A0A1W2PRG0 241 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 TCRBV5S4A2TA0A5A2 114 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 PRKAB2O43741 272 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
NEK3-204ENST00000552973 CAPN2P17655 700 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 CCND3P30281 292 aaPredicted RBP13.89□□□□□ -0.19
NEK3-204ENST00000552973 GABPAQ06546 454 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 MAP3K21Q5TCX8 1036 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 ANKLE1Q8NAG6 615 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEK3-204ENST00000552973 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 PRO3102Q9H379 93 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 RPAP3Q9H6T3 665 aaPredicted RBP13.89□□□□□ -0.19
NEK3-204ENST00000552973 DCP1AQ9NPI6 582 aaPredicted RBP13.89□□□□□ -0.19
NEK3-204ENST00000552973 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 OGDHLQ9ULD0 1010 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
NEK3-204ENST00000552973 ATAD5Q96QE3 1844 aa13.88□□□□□ -0.19
NEK3-204ENST00000552973 SMIM22K7EJ46 135 aa13.88□□□□□ -0.19
NEK3-204ENST00000552973 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
NEK3-204ENST00000552973 TMED8Q6PL24 325 aaPredicted RBP13.88□□□□□ -0.19
NEK3-204ENST00000552973 PAG1Q9NWQ8 432 aa13.88□□□□□ -0.19
NEK3-204ENST00000552973 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
NEK3-204ENST00000552973 SPDYE16A6NNV3 312 aaPredicted RBP13.87□□□□□ -0.19
NEK3-204ENST00000552973 SMARCA5O60264 1052 aaPredicted RBP13.87□□□□□ -0.19
NEK3-204ENST00000552973 MBD4O95243 580 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 SYN1P17600 705 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 CCNA1P78396 465 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 MAP2K5Q13163 448 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 CLEC10AQ8IUN9 316 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 TRMT44Q8IYL2 757 aaKnown RBP13.87□□□□□ -0.19
NEK3-204ENST00000552973 APBA2Q99767 749 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 FLRT1Q9NZU1 646 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
NEK3-204ENST00000552973 CYP2D7A0A087X1C5 515 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 AKR1B1P15121 316 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 ATP5JP18859 108 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 PTPREP23469 700 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 ADD2P35612 726 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 LHX8Q68G74 356 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
NEK3-204ENST00000552973 NPLOC4Q8TAT6 608 aa13.86□□□□□ -0.19
NEK3-204ENST00000552973 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
NEK3-204ENST00000552973 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
NEK3-204ENST00000552973 COG2Q14746 738 aa13.85□□□□□ -0.19
NEK3-204ENST00000552973 HAUS7Q99871 368 aa13.85□□□□□ -0.19
NEK3-204ENST00000552973 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
NEK3-204ENST00000552973 IVNS1ABPQ9Y6Y0 642 aa13.85□□□□□ -0.19
NEK3-204ENST00000552973 PFASO15067 1338 aa13.85□□□□□ -0.19
NEK3-204ENST00000552973 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
NEK3-204ENST00000552973 SLC15A5A6NIM6 579 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 USP17L12C9JPN9 530 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 USP17L21D6R901 530 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 CNGA1P29973 690 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms