RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 USP17L2Q6R6M4 530 aa22.01■■□□□ 1.11
PRPF40B-216ENST00000552301 ZNF589Q86UQ0 364 aaPredicted RBP22.01■■□□□ 1.11
PRPF40B-216ENST00000552301 SMCR8Q8TEV9 937 aaPredicted RBP22.01■■□□□ 1.11
PRPF40B-216ENST00000552301 LOC285556D6RIA3 1793 aa22.01■■□□□ 1.11
PRPF40B-216ENST00000552301 USP14P54578 494 aa22■■□□□ 1.11
PRPF40B-216ENST00000552301 SP3Q02447 781 aa22■■□□□ 1.11
PRPF40B-216ENST00000552301 ICA1Q05084 483 aa22■■□□□ 1.11
PRPF40B-216ENST00000552301 ZYXQ15942 572 aaKnown RBP22■■□□□ 1.11
PRPF40B-216ENST00000552301 ERO1AQ96HE7 468 aa22■■□□□ 1.11
PRPF40B-216ENST00000552301 CYP2C8P10632 490 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 OSBPP22059 807 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 GUCY1A2P33402 732 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 DGKZQ13574 1117 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 ALX1Q15699 326 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 TREML2Q5T2D2 321 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 CTU1Q7Z7A3 348 aaKnown RBP21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 SH2D4AQ9H788 454 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 ARHGEF10LQ9HCE6 1279 aa21.99■■□□□ 1.11
PRPF40B-216ENST00000552301 FOXP2O15409 715 aa21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 HSPD1P10809 573 aaKnown RBP21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 ERICH6BQ5W0A0 696 aa21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 ZNF444Q8N0Y2 327 aaPredicted RBP21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 KIAA1683Q9H0B3 1180 aa21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 CPA4Q9UI42 421 aa21.98■■□□□ 1.11
PRPF40B-216ENST00000552301 PRDM1O75626 825 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 CAPN15O75808 1086 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 RASA1P20936 1047 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 ATP2B2Q01814 1243 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 KIF22Q14807 665 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 ARHGEF6Q15052 776 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 ACER1Q8TDN7 264 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 ZMYM6O95789 1325 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 RAD50Q92878 1312 aa21.97■■□□□ 1.11
PRPF40B-216ENST00000552301 CD99L2Q8TCZ2 262 aa21.96■■□□□ 1.11
PRPF40B-216ENST00000552301 KANSL2Q9H9L4 492 aa21.96■■□□□ 1.11
PRPF40B-216ENST00000552301 FGAP02671 866 aa21.95■■□□□ 1.1
PRPF40B-216ENST00000552301 CLEC10AQ8IUN9 316 aa21.95■■□□□ 1.1
PRPF40B-216ENST00000552301 C12orf42Q96LP6 360 aa21.95■■□□□ 1.1
PRPF40B-216ENST00000552301 ASCC2Q9H1I8 757 aaPredicted RBP21.95■■□□□ 1.1
PRPF40B-216ENST00000552301 EMILIN3Q9NT22 766 aa21.95■■□□□ 1.1
PRPF40B-216ENST00000552301 ADGRA2Q96PE1 1338 aa21.95■■□□□ 1.1
PRPF40B-216ENST00000552301 TSPY3P0CV98 308 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 TSPY8P0CW00 308 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 CTDSPL2Q05D32 466 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 C17orf99Q6UX52 265 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 MCOLN1Q9GZU1 580 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 TOMM22Q9NS69 142 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 TRIM17Q9Y577 477 aa21.94■■□□□ 1.1
PRPF40B-216ENST00000552301 CHMLP26374 656 aa21.93■■□□□ 1.1
PRPF40B-216ENST00000552301 HOXA7P31268 230 aaPredicted RBP21.93■■□□□ 1.1
PRPF40B-216ENST00000552301 EFCC1Q9HA90 598 aa21.93■■□□□ 1.1
PRPF40B-216ENST00000552301 ANAPC4Q9UJX5 808 aa21.93■■□□□ 1.1
PRPF40B-216ENST00000552301 EEF2P13639 858 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 VCAM1P19320 739 aa21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 GCLCP48506 637 aaPredicted RBP21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 HAND2P61296 217 aa21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 PKN2Q16513 984 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 DSCC1Q9BVC3 393 aa21.92■■□□□ 1.1
PRPF40B-216ENST00000552301 A0A1W2PRG0 241 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 TSPY2A6NKD2 308 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L15C9J2P7 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L13C9JLJ4 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L11C9JVI0 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L18D6R9N7 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L22D6RA61 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L17D6RBQ6 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L19D6RCP7 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L20D6RJB6 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 BCRP11274 1271 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 LACTBP83111 547 aaPredicted RBP21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 USP17L24Q0WX57 530 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 BMP2KLQ5H9B9 411 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 LPAR1Q92633 364 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 GOPCQ9HD26 462 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 CTNNA3Q9UI47 895 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 TMX2Q9Y320 296 aa21.91■■□□□ 1.1
PRPF40B-216ENST00000552301 GREB1LQ9C091 1923 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 PLIN4Q96Q06 1357 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 RAD21O60216 631 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 RANBP6O60518 1105 aaKnown RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 ECM2O94769 699 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 TFAP4Q01664 338 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 RRP12Q5JTH9 1297 aaKnown RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 PPP4R3BQ5MIZ7 849 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 OTOP1Q7RTM1 612 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 ANKRD13CQ8N6S4 541 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 GTF3C2Q8WUA4 911 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 RNF41Q9H4P4 317 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 RPAP3Q9H6T3 665 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 VCPKMTQ9H867 229 aa21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.9■■□□□ 1.1
PRPF40B-216ENST00000552301 ZNF213O14771 459 aa21.89■■□□□ 1.09
PRPF40B-216ENST00000552301 ORC4O43929 436 aa21.89■■□□□ 1.09
PRPF40B-216ENST00000552301 IMMTQ16891 758 aaKnown RBP21.89■■□□□ 1.09
PRPF40B-216ENST00000552301 FAM110CQ1W6H9 321 aa21.89■■□□□ 1.09
PRPF40B-216ENST00000552301 FAM47AQ5JRC9 791 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms