RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 TRIM14Q14142 442 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 NTRK3Q16288 839 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 CFAP100Q494V2 611 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 PARP10Q53GL7 1025 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 TMEM67Q5HYA8 995 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 AKNAD1Q5T1N1 836 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 SLC9C2Q5TAH2 1124 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 TTLL5Q6EMB2 1281 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 ARMCX5Q6P1M9 558 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 NFXL1Q6ZNB6 911 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 NLRP10Q86W26 655 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 NOSTRINQ8IVI9 506 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 MSL3Q8N5Y2 521 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 TTLL11Q8NHH1 800 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 IGDCC4Q8TDY8 1250 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 ZNF592Q92610 1267 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 FERMT2Q96AC1 680 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 RBM33Q96EV2 1170 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 ZNF594Q96JF6 807 aaPredicted RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 STRBPQ96SI9 672 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 MAP3K14Q99558 947 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 PUS3Q9BZE2 481 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 FTOQ9C0B1 505 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 PUS7LQ9H0K6 701 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 NAPBQ9H115 298 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 LY9Q9HBG7 655 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 BRMS1Q9HCU9 246 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 RBM28Q9NW13 759 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 ANAPC4Q9UJX5 808 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 ZNF215Q9UL58 517 aaPredicted RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 KCNH3Q9ULD8 1083 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 SLC12A7Q9Y666 1083 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 COL24A1Q17RW2 1714 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 NRAPQ86VF7 1730 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 MROH7-TTC4A0A0A0MT08 1334 aa6.15□□□□□ -1.43
CCNT1-204ENST00000551989 UBN2Q6ZU65 1347 aa6.15□□□□□ -1.43
CCNT1-204ENST00000551989 BCL9LQ86UU0 1499 aa6.15□□□□□ -1.43
CCNT1-204ENST00000551989 NAV1Q8NEY1 1877 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 TCRBV5S4A2TA0A5A2 114 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 KIF28PB7ZC32 967 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 ADORA1P30542 326 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 TRAPPC10P48553 1259 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 SARSP49591 514 aaKnown RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 HAND2P61296 217 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 WTAPQ15007 396 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 POSTNQ15063 836 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 CHRNA2Q15822 529 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 RTN1Q16799 776 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 FILIP1LQ4L180 1135 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 TEX35Q5T0J7 233 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 SPECC1LQ69YQ0 1117 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 SHC4Q6S5L8 630 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 MFSD6Q6ZSS7 791 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 BRINP3Q76B58 766 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 HOMER1Q86YM7 354 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 IFNL3Q8IZI9 196 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 MNS1Q8NEH6 495 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 SPATA20Q8TB22 786 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 UBXN4Q92575 508 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 JARID2Q92833 1246 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 SMARCE1Q969G3 411 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 PANX2Q96RD6 677 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 CDC5LQ99459 802 aaKnown RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 CDCA7Q9BWT1 371 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 AATFQ9NY61 560 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 MYO1AQ9UBC5 1043 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 TSR3Q9UJK0 312 aaKnown RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 TSKSQ9UJT2 592 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 SRPRBQ9Y5M8 271 aaKnown RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 V9GYY5 206 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 PDS5AQ29RF7 1337 aaKnown RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 ITIH6Q6UXX5 1313 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF532Q9HCE3 1301 aa6.14□□□□□ -1.43
CCNT1-204ENST00000551989 AHDC1Q5TGY3 1603 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-204ENST00000551989 USP27XA6NNY8 438 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 B4E1Z4 1266 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 IRS4O14654 1257 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 IFIT3O14879 490 aaKnown RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 WDHD1O75717 1129 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 IDH1O75874 414 aaKnown RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 CHGBP05060 677 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 MYL1P05976 194 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF18P17022 549 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 LMOD1P29536 600 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 PLCD1P51178 756 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 AKAP17AQ02040 695 aaKnown RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 EN1Q05925 392 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 TBX2Q13207 712 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 MORC3Q14149 939 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 SCARF1Q14162 830 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 KMT5BQ4FZB7 885 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 TMCO3Q6UWJ1 677 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 CHST3Q7LGC8 479 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 MICU3Q86XE3 530 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 TBC1D10CQ8IV04 446 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 CNGA4Q8IV77 575 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 DIS3L2Q8IYB7 885 aaKnown RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 GPR161Q8N6U8 529 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms