RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 USP17L13C9JLJ4 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L11C9JVI0 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L18D6R9N7 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L22D6RA61 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L17D6RBQ6 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L19D6RCP7 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L20D6RJB6 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 SURF6O75683 361 aaKnown RBP26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 MDM2Q00987 491 aaPredicted RBP26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 USP17L24Q0WX57 530 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 CATSPERGQ6ZRH7 1159 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 MIGA1Q8NAN2 632 aa26.48■■□□□ 1.83
SMARCD1-212ENST00000551966 OS9Q13438 667 aaPredicted RBP26.47■■□□□ 1.83
SMARCD1-212ENST00000551966 CCDC8Q9H0W5 538 aaPredicted RBP26.47■■□□□ 1.83
SMARCD1-212ENST00000551966 ACER1Q8TDN7 264 aa26.46■■□□□ 1.83
SMARCD1-212ENST00000551966 BTBD7Q9P203 1132 aa26.46■■□□□ 1.83
SMARCD1-212ENST00000551966 A0A0C4DFX4 3053 aa26.46■■□□□ 1.83
SMARCD1-212ENST00000551966 PTPREP23469 700 aa26.45■■□□□ 1.82
SMARCD1-212ENST00000551966 EAF2Q96CJ1 260 aaPredicted RBP26.45■■□□□ 1.82
SMARCD1-212ENST00000551966 SENP6Q9GZR1 1112 aaPredicted RBP26.45■■□□□ 1.82
SMARCD1-212ENST00000551966 NOP58Q9Y2X3 529 aaKnown RBP26.45■■□□□ 1.82
SMARCD1-212ENST00000551966 SLC15A5A6NIM6 579 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 IDH1O75874 414 aaKnown RBP26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 RAB3GAP1Q15042 981 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 NPLOC4Q8TAT6 608 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 FEZ1Q99689 392 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 KIAA1683Q9H0B3 1180 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 EHD4Q9H223 541 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 C1orf115Q9H7X2 142 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 CWC22Q9HCG8 908 aaKnown RBP26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 SERPINB13Q9UIV8 391 aa26.44■■□□□ 1.82
SMARCD1-212ENST00000551966 MYH1P12882 1939 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 IGHA2P01877 340 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 VCAM1P19320 739 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 USP5P45974 858 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 CCNA1P78396 465 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 CERKLQ49MI3 558 aaPredicted RBP26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 MFSD14CQ5VZR4 134 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 LBX2Q6XYB7 198 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 MAGEB6Q8N7X4 407 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 ANTXR1Q9H6X2 564 aa26.43■■□□□ 1.82
SMARCD1-212ENST00000551966 POTEB2H3BUK9 544 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 GLRX3O76003 335 aaKnown RBP26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 HOXC6P09630 235 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 GUCY1A2P33402 732 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 PLCD1P51178 756 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 USP14P54578 494 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 WDR78Q5VTH9 848 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 TRPV1Q8NER1 839 aa26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 DDX20Q9UHI6 824 aaKnown RBP26.42■■□□□ 1.82
SMARCD1-212ENST00000551966 SHMT1P34896 483 aa26.41■■□□□ 1.82
SMARCD1-212ENST00000551966 ATP2B2Q01814 1243 aa26.41■■□□□ 1.82
SMARCD1-212ENST00000551966 GRB14Q14449 540 aa26.41■■□□□ 1.82
SMARCD1-212ENST00000551966 ABCB5Q2M3G0 1257 aa26.41■■□□□ 1.82
SMARCD1-212ENST00000551966 ZKSCAN2Q63HK3 967 aa26.41■■□□□ 1.82
SMARCD1-212ENST00000551966 FRMPD3Q5JV73 1810 aa26.4■■□□□ 1.82
SMARCD1-212ENST00000551966 SPDYE16A6NNV3 312 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-212ENST00000551966 CNGA1P29973 690 aa26.4■■□□□ 1.82
SMARCD1-212ENST00000551966 CYP2C19P33261 490 aa26.4■■□□□ 1.82
SMARCD1-212ENST00000551966 TTC6Q86TZ1 520 aa26.4■■□□□ 1.82
SMARCD1-212ENST00000551966 LPAR1Q92633 364 aa26.4■■□□□ 1.82
SMARCD1-212ENST00000551966 ATN1P54259 1190 aaPredicted RBP26.39■■□□□ 1.82
SMARCD1-212ENST00000551966 RPAP3Q9H6T3 665 aaPredicted RBP26.39■■□□□ 1.82
SMARCD1-212ENST00000551966 EVX2Q03828 476 aa26.38■■□□□ 1.81
SMARCD1-212ENST00000551966 CERS3Q8IU89 383 aa26.38■■□□□ 1.81
SMARCD1-212ENST00000551966 RIOK1Q9BRS2 568 aaKnown RBP26.38■■□□□ 1.81
SMARCD1-212ENST00000551966 CABP5Q9NP86 173 aa26.38■■□□□ 1.81
SMARCD1-212ENST00000551966 SEPT2Q15019 361 aa26.37■■□□□ 1.81
SMARCD1-212ENST00000551966 FAM109BQ6ICB4 259 aaPredicted RBP26.37■■□□□ 1.81
SMARCD1-212ENST00000551966 GUCD1Q96NT3 240 aa26.37■■□□□ 1.81
SMARCD1-212ENST00000551966 IVNS1ABPQ9Y6Y0 642 aa26.37■■□□□ 1.81
SMARCD1-212ENST00000551966 A0A1W2PRG0 241 aa26.36■■□□□ 1.81
SMARCD1-212ENST00000551966 MSCO60682 206 aa26.36■■□□□ 1.81
SMARCD1-212ENST00000551966 GABPAQ06546 454 aa26.36■■□□□ 1.81
SMARCD1-212ENST00000551966 DNAH12Q6ZR08 3092 aa26.36■■□□□ 1.81
SMARCD1-212ENST00000551966 CCER2I3L3R5 266 aa26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 DNM1LO00429 736 aa26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 CYBAP13498 195 aa26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 MAP3K12Q12852 859 aa26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 GJC2Q5T442 439 aaPredicted RBP26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 LBHD1Q9BQE6 289 aaPredicted RBP26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 MOV10L1Q9BXT6 1211 aaKnown RBP26.35■■□□□ 1.81
SMARCD1-212ENST00000551966 RTP1P59025 263 aa26.34■■□□□ 1.81
SMARCD1-212ENST00000551966 COG2Q14746 738 aa26.34■■□□□ 1.81
SMARCD1-212ENST00000551966 RLBP1P12271 317 aa26.33■■□□□ 1.81
SMARCD1-212ENST00000551966 KIAA1755Q5JYT7 1200 aa26.33■■□□□ 1.81
SMARCD1-212ENST00000551966 DPP9Q86TI2 863 aa26.33■■□□□ 1.81
SMARCD1-212ENST00000551966 FAM161BQ96MY7 647 aa26.33■■□□□ 1.81
SMARCD1-212ENST00000551966 COL25A1Q9BXS0 654 aaPredicted RBP26.33■■□□□ 1.81
SMARCD1-212ENST00000551966 COBLO75128 1261 aa26.32■■□□□ 1.8
SMARCD1-212ENST00000551966 POLR3DP05423 398 aaPredicted RBP26.32■■□□□ 1.8
SMARCD1-212ENST00000551966 ADORA2AP29274 412 aa26.32■■□□□ 1.8
SMARCD1-212ENST00000551966 ANO1Q5XXA6 986 aa26.32■■□□□ 1.8
SMARCD1-212ENST00000551966 SLC39A5Q6ZMH5 540 aa26.32■■□□□ 1.8
SMARCD1-212ENST00000551966 HOXC10Q9NYD6 342 aa26.32■■□□□ 1.8
SMARCD1-212ENST00000551966 STRNO43815 780 aa26.31■■□□□ 1.8
SMARCD1-212ENST00000551966 OLFML2BQ68BL8 750 aa26.31■■□□□ 1.8
SMARCD1-212ENST00000551966 TMED8Q6PL24 325 aaPredicted RBP26.31■■□□□ 1.8
SMARCD1-212ENST00000551966 MAGEB6P1A0A0J9YX57 407 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 ERCC3P19447 782 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms