RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FAM86C2PA6NEL3 165 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 SLC22A31A6NKX4 558 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 ZNF862O60290 1169 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 PGRP06401 933 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 AMPD1P23109 780 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 SSRP1Q08945 709 aaKnown RBP7.46□□□□□ -1.22
CPSF6-206ENST00000550987 PLEKHG4Q58EX7 1191 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 C8orf86Q6ZUL3 223 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 DMRTC2Q8IXT2 367 aaPredicted RBP7.46□□□□□ -1.22
CPSF6-206ENST00000550987 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 SPC25Q9HBM1 224 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 CACNA2D2Q9NY47 1150 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 TACC3Q9Y6A5 838 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 SHANK3Q9BYB0 1731 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 PRR36Q9H6K5 1346 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 TNIKQ9UKE5 1360 aa7.46□□□□□ -1.22
CPSF6-206ENST00000550987 B2RBV5 119 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 DNAJC6O75061 913 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 GRK4P32298 578 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 NCAPHQ15003 741 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 INTS3Q68E01 1043 aaKnown RBP7.45□□□□□ -1.22
CPSF6-206ENST00000550987 VHLLQ6RSH7 139 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 UNC5AQ6ZN44 842 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 EEPD1Q7L9B9 569 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 NLRC3Q7RTR2 1065 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 MAP4K3Q8IVH8 894 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 THAP3Q8WTV1 239 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-206ENST00000550987 ATG4CQ96DT6 458 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-206ENST00000550987 KANSL2Q9H9L4 492 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 IFT57Q9NWB7 429 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 XIRP1Q702N8 1843 aaKnown RBP7.45□□□□□ -1.22
CPSF6-206ENST00000550987 AATKQ6ZMQ8 1374 aa7.45□□□□□ -1.22
CPSF6-206ENST00000550987 ADGBQ8N7X0 1667 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 NME1P15531 152 aaKnown RBP7.44□□□□□ -1.22
CPSF6-206ENST00000550987 RAG1P15918 1043 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 CD68P34810 354 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-206ENST00000550987 SRSF11Q05519 484 aaKnown RBP7.44□□□□□ -1.22
CPSF6-206ENST00000550987 ARSHQ5FYA8 562 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 OVOS1Q6IE37 1185 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 CHSY3Q70JA7 882 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 CYFIP1Q7L576 1253 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 PHAXQ9H814 394 aaKnown RBP7.44□□□□□ -1.22
CPSF6-206ENST00000550987 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
CPSF6-206ENST00000550987 H3BM21 787 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 DDX3YO15523 660 aaKnown RBP7.43□□□□□ -1.22
CPSF6-206ENST00000550987 AOC2O75106 756 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 CTSBP07858 339 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 KIF4BQ2VIQ3 1234 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 GNPTABQ3T906 1256 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 RNFT1Q5M7Z0 435 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 TAB3Q8N5C8 712 aaPredicted RBP7.43□□□□□ -1.22
CPSF6-206ENST00000550987 ST13P5Q8NFI4 369 aaPredicted RBP7.43□□□□□ -1.22
CPSF6-206ENST00000550987 DCAF11Q8TEB1 546 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 BTBD6Q96KE9 485 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 NRSN2Q9GZP1 204 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
CPSF6-206ENST00000550987 PRKAB1Q9Y478 270 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 FHOD3Q2V2M9 1422 aa7.43□□□□□ -1.22
CPSF6-206ENST00000550987 LOC100289279A0A1B0GTE1 492 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 CHURC1-FNTBB4DL54 471 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 SELPP16109 830 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 YARSP54577 528 aaKnown RBP7.42□□□□□ -1.22
CPSF6-206ENST00000550987 GYS2P54840 703 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 SLC7A5Q01650 507 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 C2orf27AQ580R0 203 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 ZC3H12AQ5D1E8 599 aaKnown RBP7.42□□□□□ -1.22
CPSF6-206ENST00000550987 AKAP4Q5JQC9 854 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 EXOSC6Q5RKV6 272 aaKnown RBP7.42□□□□□ -1.22
CPSF6-206ENST00000550987 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 KIAA1211LQ6NV74 962 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 SPATC1Q76KD6 591 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 CDC37L1Q7L3B6 337 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 PHACTR4Q8IZ21 702 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 GALNT11Q8NCW6 608 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 FAM13CQ8NE31 585 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 ACDQ96AP0 544 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 GPATCH3Q96I76 525 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 DHRS1Q96LJ7 313 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 SLC9A7Q96T83 725 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 WNT10AQ9GZT5 417 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 TMX1Q9H3N1 280 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 ZMYM5Q9UJ78 669 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 ADAM30Q9UKF2 790 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 COL4A3BPQ9Y5P4 624 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 PCNTO95613 3336 aa7.42□□□□□ -1.22
CPSF6-206ENST00000550987 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
CPSF6-206ENST00000550987 DIAPH1O60610 1272 aaKnown RBP7.41□□□□□ -1.22
CPSF6-206ENST00000550987 ADAMTS2O95450 1211 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 ID3Q02535 119 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 R3HDM1Q15032 1099 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms