RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 TSPY8P0CW00 308 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 NOGQ13253 232 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 BRF1Q92994 677 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-216ENST00000550391 CCDC17Q96LX7 622 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-216ENST00000550391 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-216ENST00000550391 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-216ENST00000550391 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
CACNB3-216ENST00000550391 PLIN4Q96Q06 1357 aa16.58■□□□□ 0.24
CACNB3-216ENST00000550391 TNKSO95271 1327 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 LIFRP42702 1097 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 SEC23AQ15436 765 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 NBPF12Q5TAG4 269 aaPredicted RBP16.57■□□□□ 0.24
CACNB3-216ENST00000550391 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
CACNB3-216ENST00000550391 TMTC2Q8N394 836 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 HOOK2Q96ED9 719 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 LARP6Q9BRS8 491 aaKnown RBP16.57■□□□□ 0.24
CACNB3-216ENST00000550391 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
CACNB3-216ENST00000550391 AKR1B1P15121 316 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 EVCP57679 992 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 FMR1Q06787 632 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNB3-216ENST00000550391 WTAPQ15007 396 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 CERKLQ49MI3 558 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-216ENST00000550391 MIGA2Q7L4E1 593 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNB3-216ENST00000550391 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
CACNB3-216ENST00000550391 IGKV6D-41A0A0C4DH26 115 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 ADM5C9JUS6 153 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 NMT2O60551 498 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 NOVP48745 357 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 APOBRQ0VD83 1088 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
CACNB3-216ENST00000550391 PRAMEF18Q5VWM3 479 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-216ENST00000550391 ANKS1AQ92625 1134 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 SH2B1Q9NRF2 756 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-216ENST00000550391 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
CACNB3-216ENST00000550391 DLL1O00548 723 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 LARGE1O95461 756 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 ME3Q16798 604 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 SUPT20HL1Q3ZLR7 823 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 DCAF15Q66K64 600 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 NFXL1Q6ZNB6 911 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 DGKHQ86XP1 1220 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-216ENST00000550391 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
CACNB3-216ENST00000550391 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 CCDC69A6NI79 296 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 TRAF5O00463 557 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 ABCB5Q2M3G0 1257 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 IFIT1BQ5T764 474 aaKnown RBP16.53■□□□□ 0.24
CACNB3-216ENST00000550391 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 CTU1Q7Z7A3 348 aaKnown RBP16.53■□□□□ 0.24
CACNB3-216ENST00000550391 USP48Q86UV5 1035 aa16.53■□□□□ 0.24
CACNB3-216ENST00000550391 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 CELF2O95319 508 aaKnown RBP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 GDF11O95390 407 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 GUCY1A2P33402 732 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 CAP2P40123 477 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 JAG1P78504 1218 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 CUL4AQ13619 759 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 DLK2Q6UY11 383 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 ZNF341Q9BYN7 854 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 ZNF112Q9UJU3 913 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 NAP1L2Q9ULW6 460 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-216ENST00000550391 SLC12A7Q9Y666 1083 aa16.52■□□□□ 0.24
CACNB3-216ENST00000550391 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
CACNB3-216ENST00000550391 PFKFB2O60825 505 aa16.51■□□□□ 0.23
CACNB3-216ENST00000550391 APOA5Q6Q788 366 aa16.51■□□□□ 0.23
CACNB3-216ENST00000550391 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
CACNB3-216ENST00000550391 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-216ENST00000550391 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-216ENST00000550391 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 ZBTB43O43298 467 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms