RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 CEP85Q6P2H3 762 aa14.14□□□□□ -0.15
SMARCD1-208ENST00000550280 Q7L0L9 218 aa14.14□□□□□ -0.15
SMARCD1-208ENST00000550280 APBA2Q99767 749 aa14.14□□□□□ -0.15
SMARCD1-208ENST00000550280 EHD4Q9H223 541 aa14.14□□□□□ -0.15
SMARCD1-208ENST00000550280 VCAM1P19320 739 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 RGS2P41220 211 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 GABPAQ06546 454 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 MAP2K5Q13163 448 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 CATSPERGQ6ZRH7 1159 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 KIAA1683Q9H0B3 1180 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 SERPINB13Q9UIV8 391 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 EXOC6BQ9Y2D4 811 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 RABGAP1Q9Y3P9 1069 aa14.13□□□□□ -0.15
SMARCD1-208ENST00000550280 MYH1P12882 1939 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 A0A1W2PRG0 241 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 SPDYE16A6NNV3 312 aaPredicted RBP14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 LRIT3Q3SXY7 679 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 KIAA1755Q5JYT7 1200 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 LBX2Q6XYB7 198 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 ITPRIPQ8IWB1 547 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 TRPV1Q8NER1 839 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 GTF3C2Q8WUA4 911 aaPredicted RBP14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 TRIM34Q9BYJ4 488 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 A0A0C4DFX4 3053 aa14.12□□□□□ -0.15
SMARCD1-208ENST00000550280 SMIM22K7EJ46 135 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 PTPREP23469 700 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 USP5P45974 858 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 CERKLQ49MI3 558 aaPredicted RBP14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 DNAH12Q6ZR08 3092 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 TRMT44Q8IYL2 757 aaKnown RBP14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 TDHQ8IZJ6 230 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 FRMPD3Q5JV73 1810 aa14.11□□□□□ -0.15
SMARCD1-208ENST00000550280 TCRBV5S4A2TA0A5A2 114 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 HOXC6P09630 235 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 GRB14Q14449 540 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 SEPT2Q15019 361 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 ABCB5Q2M3G0 1257 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 SLFNL1Q499Z3 407 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 AACSQ86V21 672 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 SLC17A8Q8NDX2 589 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 EDC3Q96F86 508 aaKnown RBP14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 FEZ1Q99689 392 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 RPAP3Q9H6T3 665 aaPredicted RBP14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 IL1RAPL2Q9NP60 686 aa14.1□□□□□ -0.15
SMARCD1-208ENST00000550280 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 CYP2D6P10635 497 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 PDE6AP16499 860 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 CYP2C19P33261 490 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 USP14P54578 494 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 GPR153Q6NV75 609 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 TTC6Q86TZ1 520 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 CLEC10AQ8IUN9 316 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 SIAH1Q8IUQ4 282 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 DEFB123Q8N688 67 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 SLC44A5Q8NCS7 719 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 MTMR10Q9NXD2 777 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 LAMA2P24043 3122 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 RLFQ13129 1914 aa14.09□□□□□ -0.15
SMARCD1-208ENST00000550280 A0A0G2JMZ2 1700 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 CHGBP05060 677 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 CYBAP13498 195 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 MDM2Q00987 491 aaPredicted RBP14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 MAP3K12Q12852 859 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 SIRT2Q8IXJ6 389 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 LCORLQ8N3X6 602 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 SDR42E1Q8WUS8 393 aa14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 UBE2OQ9C0C9 1292 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 DDX20Q9UHI6 824 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-208ENST00000550280 MAGEB6P1A0A0J9YX57 407 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 DLL1O00548 723 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 CCNA1P78396 465 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 WDR78Q5VTH9 848 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 CERS3Q8IU89 383 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 NAV1Q8NEY1 1877 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 ZNF532Q9HCE3 1301 aa14.07□□□□□ -0.16
SMARCD1-208ENST00000550280 UNC80Q8N2C7 3258 aa14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 COBLO75128 1261 aa14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 HNRNPUQ00839 825 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 MFSD14CQ5VZR4 134 aa14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 DYNLL2Q96FJ2 89 aa14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 SENP6Q9GZR1 1112 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms