RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 RNF208Q9H0X6 261 aa19.25■□□□□ 0.67
COX6A1-203ENST00000550009 PORCNQ9H237 461 aa19.25■□□□□ 0.67
COX6A1-203ENST00000550009 GREB1LQ9C091 1923 aaPredicted RBP19.24■□□□□ 0.67
COX6A1-203ENST00000550009 FRMPD3Q5JV73 1810 aa19.24■□□□□ 0.67
COX6A1-203ENST00000550009 C19orf81C9J6K1 198 aa19.24■□□□□ 0.67
COX6A1-203ENST00000550009 RRP1P56182 461 aaKnown RBP19.24■□□□□ 0.67
COX6A1-203ENST00000550009 USP17L2Q6R6M4 530 aa19.24■□□□□ 0.67
COX6A1-203ENST00000550009 PAGR1Q9BTK6 254 aa19.24■□□□□ 0.67
COX6A1-203ENST00000550009 CHMP4BQ9H444 224 aaKnown RBP19.24■□□□□ 0.67
COX6A1-203ENST00000550009 MORF4L1Q9UBU8 362 aa19.24■□□□□ 0.67
COX6A1-203ENST00000550009 MYH4Q9Y623 1939 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
COX6A1-203ENST00000550009 AKR1B1P15121 316 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 GCLCP48506 637 aaPredicted RBP19.23■□□□□ 0.67
COX6A1-203ENST00000550009 PABPC4Q13310 644 aaKnown RBP eCLIP19.23■□□□□ 0.671e-21■□□□□ 9.4
COX6A1-203ENST00000550009 CERS3Q8IU89 383 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 SLAIN1Q8ND83 568 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 FEZ1Q99689 392 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 ECHDC1Q9NTX5 307 aa19.23■□□□□ 0.67
COX6A1-203ENST00000550009 VCAM1P19320 739 aa19.22■□□□□ 0.67
COX6A1-203ENST00000550009 IRF5Q13568 498 aa19.22■□□□□ 0.67
COX6A1-203ENST00000550009 STK11IPQ8N1F8 1099 aa19.22■□□□□ 0.67
COX6A1-203ENST00000550009 COA7Q96BR5 231 aa19.22■□□□□ 0.67
COX6A1-203ENST00000550009 GINM1Q9NU53 330 aa19.22■□□□□ 0.67
COX6A1-203ENST00000550009 A0A0G2JMZ2 1700 aa19.22■□□□□ 0.67
COX6A1-203ENST00000550009 USP17L12C9JPN9 530 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 USP17L21D6R901 530 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 GJA8P48165 433 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 RANBP2P49792 3224 aaKnown RBP19.21■□□□□ 0.67
COX6A1-203ENST00000550009 UBE3CQ15386 1083 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 C12orf42Q96LP6 360 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 SLC4A4Q9Y6R1 1079 aa19.21■□□□□ 0.67
COX6A1-203ENST00000550009 M0R2C6 588 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 GJB1P08034 283 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 CYP2B6P20813 491 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 ERVK-9P63128 1117 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 ERVK-24P63145 666 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 TMED8Q6PL24 325 aaPredicted RBP19.2■□□□□ 0.66
COX6A1-203ENST00000550009 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 UBE2Q1Q7Z7E8 422 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 U2AF1L4Q8WU68 220 aaKnown RBP19.2■□□□□ 0.66
COX6A1-203ENST00000550009 TRIB2Q92519 343 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 KIAA1683Q9H0B3 1180 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
COX6A1-203ENST00000550009 PCDH10Q9P2E7 1040 aa19.2■□□□□ 0.66
COX6A1-203ENST00000550009 SLC34A2O95436 690 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 CDK8P49336 464 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 UBXN2AP68543 259 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 CCL14Q16627 93 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 C12orf60Q5U649 245 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 GPRC5AQ8NFJ5 357 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 PXYLP1Q8TE99 480 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 DEFB118Q96PH6 123 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
COX6A1-203ENST00000550009 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.19■□□□□ 0.66
COX6A1-203ENST00000550009 CABP5Q9NP86 173 aa19.19■□□□□ 0.66
COX6A1-203ENST00000550009 PI4K2BQ8TCG2 481 aa19.18■□□□□ 0.66
COX6A1-203ENST00000550009 DIS3LQ8TF46 1054 aaKnown RBP19.18■□□□□ 0.66
COX6A1-203ENST00000550009 STRBPQ96SI9 672 aaKnown RBP19.18■□□□□ 0.66
COX6A1-203ENST00000550009 ATP8A2Q9NTI2 1148 aa19.18■□□□□ 0.66
COX6A1-203ENST00000550009 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
COX6A1-203ENST00000550009 GSG1L2A8MUP6 293 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L15C9J2P7 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L13C9JLJ4 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L11C9JVI0 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L18D6R9N7 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L22D6RA61 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L17D6RBQ6 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L19D6RCP7 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L20D6RJB6 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 SGPL1O95470 568 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 USP17L24Q0WX57 530 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 SPICE1Q8N0Z3 855 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 KBTBD3Q8NAB2 608 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 EPB41L4AQ9HCS5 686 aaPredicted RBP19.17■□□□□ 0.66
COX6A1-203ENST00000550009 PAK6Q9NQU5 681 aaPredicted RBP19.17■□□□□ 0.66
COX6A1-203ENST00000550009 SZT2Q5T011 3432 aa19.17■□□□□ 0.66
COX6A1-203ENST00000550009 H0YGN5 161 aa19.16■□□□□ 0.66
COX6A1-203ENST00000550009 MORN1Q5T089 497 aa19.16■□□□□ 0.66
COX6A1-203ENST00000550009 C16orf86Q6ZW13 317 aa19.16■□□□□ 0.66
COX6A1-203ENST00000550009 USP6NLQ92738 828 aa19.16■□□□□ 0.66
COX6A1-203ENST00000550009 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
COX6A1-203ENST00000550009 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
COX6A1-203ENST00000550009 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
COX6A1-203ENST00000550009 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.15■□□□□ 0.66
COX6A1-203ENST00000550009 FLRT1Q9NZU1 646 aa19.15■□□□□ 0.66
COX6A1-203ENST00000550009 SALL3Q9BXA9 1300 aa19.15■□□□□ 0.66
COX6A1-203ENST00000550009 RNF113AO15541 343 aaKnown RBP19.14■□□□□ 0.65
COX6A1-203ENST00000550009 HMGCRP04035 888 aa19.14■□□□□ 0.65
COX6A1-203ENST00000550009 MNX1P50219 401 aaPredicted RBP19.14■□□□□ 0.65
COX6A1-203ENST00000550009 USP14P54578 494 aa19.14■□□□□ 0.65
COX6A1-203ENST00000550009 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
COX6A1-203ENST00000550009 TMEM179Q6ZVK1 233 aa19.14■□□□□ 0.65
COX6A1-203ENST00000550009 FARP2O94887 1054 aaPredicted RBP19.13■□□□□ 0.65
COX6A1-203ENST00000550009 TFRCP02786 760 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms