RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 MTMR2Q13614 643 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
CCDC38-207ENST00000549752 SLC4A8Q2Y0W8 1093 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
CCDC38-207ENST00000549752 COA7Q96BR5 231 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 FEZ1Q99689 392 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 DNAJC18Q9H819 358 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 MCM9Q9NXL9 1143 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
CCDC38-207ENST00000549752 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 TNPO2O14787 897 aaKnown RBP12.56□□□□□ -0.4
CCDC38-207ENST00000549752 ERC2O15083 957 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 GH2P01242 217 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
CCDC38-207ENST00000549752 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
CCDC38-207ENST00000549752 GRK4P32298 578 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 UBXN2AP68543 259 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
CCDC38-207ENST00000549752 DCP1AQ9NPI6 582 aaPredicted RBP12.56□□□□□ -0.4
CCDC38-207ENST00000549752 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
CCDC38-207ENST00000549752 SMARCA5O60264 1052 aaPredicted RBP12.55□□□□□ -0.4
CCDC38-207ENST00000549752 MBD4O95243 580 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 CAPN2P17655 700 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 CAP1Q01518 475 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 ANKRD13CQ8N6S4 541 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 NKX2-3Q8TAU0 364 aa12.55□□□□□ -0.4
CCDC38-207ENST00000549752 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
CCDC38-207ENST00000549752 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
CCDC38-207ENST00000549752 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
CCDC38-207ENST00000549752 PLXNB2O15031 1838 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 PLCD1P51178 756 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 IRF5Q13568 498 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 CCAR1Q8IX12 1150 aaKnown RBP12.54□□□□□ -0.4
CCDC38-207ENST00000549752 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 KBTBD3Q8NAB2 608 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 PXYLP1Q8TE99 480 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
CCDC38-207ENST00000549752 ARMT1Q9H993 441 aa12.54□□□□□ -0.4
CCDC38-207ENST00000549752 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
CCDC38-207ENST00000549752 CTGFP29279 349 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 SHMT1P34896 483 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 PRKCZQ05513 592 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 GABPAQ06546 454 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 E2F4Q16254 413 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 SH3TC2Q8TF17 1288 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 CCDC17Q96LX7 622 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 KIAA1683Q9H0B3 1180 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 SH2D4AQ9H788 454 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
CCDC38-207ENST00000549752 BRCA2P51587 3418 aa12.52□□□□□ -0.4
CCDC38-207ENST00000549752 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 MAP3K13O43283 966 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 ADCY3O60266 1144 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 GLRX3O76003 335 aaKnown RBP12.52□□□□□ -0.41
CCDC38-207ENST00000549752 GNAT2P19087 354 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 FLT3LGP49771 235 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 HERVK_113P62684 666 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 JAG1P78504 1218 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 GIMAP6Q6P9H5 292 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC38-207ENST00000549752 GPRC5AQ8NFJ5 357 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 APPBP2Q92624 585 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 ARHGEF10LQ9HCE6 1279 aa12.52□□□□□ -0.41
CCDC38-207ENST00000549752 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
CCDC38-207ENST00000549752 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.41
CCDC38-207ENST00000549752 RLFQ13129 1914 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
CCDC38-207ENST00000549752 MAPK4P31152 587 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 CCNA1P78396 465 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
CCDC38-207ENST00000549752 SOCS4Q8WXH5 440 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 CRBNQ96SW2 442 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
CCDC38-207ENST00000549752 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
CCDC38-207ENST00000549752 MKI67P46013 3256 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms