RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 TEX13AQ9BXU3 409 aaPredicted RBP7.59□□□□□ -1.19
EFCAB2-215ENST00000549220 SAP130Q9H0E3 1048 aa7.59□□□□□ -1.19
EFCAB2-215ENST00000549220 JPH1Q9HDC5 661 aaPredicted RBP7.59□□□□□ -1.19
EFCAB2-215ENST00000549220 FRRS1LQ9P0K9 344 aa7.59□□□□□ -1.19
EFCAB2-215ENST00000549220 WWC3Q9ULE0 1092 aa7.59□□□□□ -1.19
EFCAB2-215ENST00000549220 SRCAPQ6ZRS2 3230 aa7.59□□□□□ -1.19
EFCAB2-215ENST00000549220 DLEC1Q9Y238 1755 aa7.59□□□□□ -1.2
EFCAB2-215ENST00000549220 KIAA1551Q9HCM1 1747 aa7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 TCERG1O14776 1098 aaKnown RBP7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 ARSDP51689 593 aa7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 GNAI1P63096 354 aa7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 GPLD1P80108 840 aa7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 ELOAQ14241 798 aaKnown RBP7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 DHX32Q7L7V1 743 aaKnown RBP7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 COL11A2P13942 1736 aaPredicted RBP7.58□□□□□ -1.2
EFCAB2-215ENST00000549220 USP42Q9H9J4 1324 aaKnown RBP7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 FAM177BA6PVY3 158 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 CHL1O00533 1208 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 TNFRSF10BO14763 440 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 SASH3O75995 380 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 MMP10P09238 476 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 HOXD8P13378 290 aaPredicted RBP7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 AIMP1Q12904 312 aaKnown RBP7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 DUSP27Q5VZP5 1158 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 ETFBKMTQ8IXQ9 262 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 ZNF428Q96B54 188 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 IGFLR1Q9H665 355 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 IFT57Q9NWB7 429 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 NRXN2Q9P2S2 1712 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 ARFGEF1Q9Y6D6 1849 aa7.57□□□□□ -1.2
EFCAB2-215ENST00000549220 A0A087WZG4 1122 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 C9orf172C9J069 976 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 NPHP1O15259 732 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 DEAF1O75398 565 aaPredicted RBP7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 GYS1P13807 737 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 TBC1D8BQ0IIM8 1120 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 PROSER3Q2NL68 480 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 C8orf58Q8NAV2 365 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 STK32AQ8WU08 396 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 CHPF2Q9P2E5 772 aa7.56□□□□□ -1.2
EFCAB2-215ENST00000549220 DDX60Q8IY21 1712 aaKnown RBP7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 TNRC6CQ9HCJ0 1690 aaKnown RBP7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 TM4SF5O14894 197 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 ZNF853P0CG23 659 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 IL6STP40189 918 aaPredicted RBP7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 HNRNPUQ00839 825 aaKnown RBP eCLIP7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 SWI5Q1ZZU3 235 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 KIF6Q6ZMV9 814 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 FAM35AQ86V20 835 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 TREML1Q86YW5 311 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 TSPYL6Q8N831 410 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 BABAM1Q9NWV8 329 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 TLR7Q9NYK1 1049 aaKnown RBP7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 NARFQ9UHQ1 456 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 SBF1O95248 1867 aa7.55□□□□□ -1.2
EFCAB2-215ENST00000549220 RGS9O75916 674 aaPredicted RBP7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 H2AFB1P0C5Y9 115 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 H2AFB2P0C5Z0 115 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 CPB1P15086 417 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 GPTP24298 496 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 NRLP54845 237 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 MLLT1Q03111 559 aaPredicted RBP7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 EXOSC9Q06265 439 aaKnown RBP7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 TRIP4Q15650 581 aaPredicted RBP7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 TTLL7Q6ZT98 887 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 TXNRD3Q86VQ6 643 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 FBXO11Q86XK2 927 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 HOMEZQ8IX15 550 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 NLGN2Q8NFZ4 835 aa7.54□□□□□ -1.2
EFCAB2-215ENST00000549220 SLX4Q8IY92 1834 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 CAMTA2O94983 1202 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 EPB42P16452 691 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 RFX1P22670 979 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 DDR1Q08345 913 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 NFIXQ14938 502 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 HLFQ16534 295 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 TWISTNBQ3B726 338 aaPredicted RBP7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 WDR63Q8IWG1 891 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 XAGE3Q8WTP9 111 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 PNMA5Q96PV4 448 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 SYT17Q9BSW7 474 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 MYH16Q9H6N6 1097 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 ZNF652Q9Y2D9 606 aa7.53□□□□□ -1.2
EFCAB2-215ENST00000549220 IL16Q14005 1332 aa7.52□□□□□ -1.2
EFCAB2-215ENST00000549220 MMP20O60882 483 aa7.52□□□□□ -1.21
EFCAB2-215ENST00000549220 SERPINB2P05120 415 aa7.52□□□□□ -1.21
EFCAB2-215ENST00000549220 RARAP10276 462 aa7.52□□□□□ -1.21
EFCAB2-215ENST00000549220 NRG1Q02297 640 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms