RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 USP17L10C9JJH3 530 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 RANBP6O60518 1105 aaKnown RBP11.39□□□□□ -0.59
RAB5B-205ENST00000549034 TBC1D8O95759 1140 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 BACE1P56817 501 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 TFAP4Q01664 338 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 ATP2B2Q01814 1243 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 IMMTQ16891 758 aaKnown RBP11.39□□□□□ -0.59
RAB5B-205ENST00000549034 DDX60LQ5H9U9 1706 aaKnown RBP11.39□□□□□ -0.59
RAB5B-205ENST00000549034 FAM47AQ5JRC9 791 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 MFSD6Q6ZSS7 791 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 TMOD4Q9NZQ9 345 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 TSKSQ9UJT2 592 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 PHIPQ8WWQ0 1821 aa11.39□□□□□ -0.59
RAB5B-205ENST00000549034 A0A0G2JLL6 359 aaPredicted RBP11.38□□□□□ -0.59
RAB5B-205ENST00000549034 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 IGF2BP3O00425 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
RAB5B-205ENST00000549034 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 TSPY3P0CV98 308 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 TSPY8P0CW00 308 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 HMGCS2P54868 508 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 MTMR2Q13614 643 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 ZYXQ15942 572 aaKnown RBP11.38□□□□□ -0.59
RAB5B-205ENST00000549034 AKNAD1Q5T1N1 836 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 PRRT2Q7Z6L0 340 aaPredicted RBP11.38□□□□□ -0.59
RAB5B-205ENST00000549034 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 MAP4K1Q92918 833 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 FEZ1Q99689 392 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
RAB5B-205ENST00000549034 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
RAB5B-205ENST00000549034 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 PDHXO00330 501 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 FOXN1O15353 648 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 DGKZQ13574 1117 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
RAB5B-205ENST00000549034 NEDD1Q8NHV4 660 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 LSG1Q9H089 658 aaKnown RBP11.37□□□□□ -0.59
RAB5B-205ENST00000549034 ARHGEF10LQ9HCE6 1279 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 CLIP2Q9UDT6 1046 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
RAB5B-205ENST00000549034 RBM8AQ9Y5S9 174 aaKnown RBP11.37□□□□□ -0.59
RAB5B-205ENST00000549034 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
RAB5B-205ENST00000549034 LAMB1P07942 1786 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 CA12O43570 354 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 ORC4O43929 436 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 RAD21O60216 631 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 FGRP09769 529 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 EEF2P13639 858 aaKnown RBP11.36□□□□□ -0.59
RAB5B-205ENST00000549034 USP14P54578 494 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 ICA1Q05084 483 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 MOGSQ13724 837 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 TAF1CQ15572 869 aaPredicted RBP11.36□□□□□ -0.59
RAB5B-205ENST00000549034 SH3D19Q5HYK7 790 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 CLEC10AQ8IUN9 316 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 TBC1D10CQ8IV04 446 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 STAG1Q8WVM7 1258 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
RAB5B-205ENST00000549034 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
RAB5B-205ENST00000549034 CYP21A2P08686 494 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 PCP11498 1178 aaKnown RBP11.35□□□□□ -0.59
RAB5B-205ENST00000549034 OSBPP22059 807 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-205ENST00000549034 LBX1P52954 281 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 TREML2Q5T2D2 321 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-205ENST00000549034 KIAA1683Q9H0B3 1180 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 SAGE1Q9NXZ1 904 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 AGTPBP1Q9UPW5 1226 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 TMX2Q9Y320 296 aa11.35□□□□□ -0.59
RAB5B-205ENST00000549034 NMT2O60551 498 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 CYP2C8P10632 490 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 TRDNQ13061 729 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.59
RAB5B-205ENST00000549034 CRHR2Q13324 411 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 ESR2Q92731 530 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 KRT23Q9C075 422 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 SH2D4AQ9H788 454 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 MTMR4Q9NYA4 1195 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 ZSWIM5Q9P217 1185 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 NYAP2Q9P242 653 aa11.34□□□□□ -0.59
RAB5B-205ENST00000549034 PTPRFP10586 1907 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 IGKV6D-41A0A0C4DH26 115 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 B4E1Z4 1266 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 E7EWF7 191 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 KDM4AO75164 1064 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms