RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SYMPKQ92797 1274 aaKnown RBP16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 PAGE5Q96GU1 130 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 MYH6P13533 1939 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 ADGRA1Q86SQ6 560 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 PANX2Q96RD6 677 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 FUT8Q9BYC5 575 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
RAPGEF3-218ENST00000548919 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.17
RAPGEF3-218ENST00000548919 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.08■□□□□ 0.17
RAPGEF3-218ENST00000548919 NID2Q14112 1375 aa16.08■□□□□ 0.17
RAPGEF3-218ENST00000548919 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 CASP14P31944 242 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 CUL4BQ13620 913 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 SPATA1Q5VX52 437 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 ADD3Q9UEY8 706 aaKnown RBP16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 TXLNAP40222 546 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 DPYDQ12882 1025 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 TNKSO95271 1327 aa16.08■□□□□ 0.16
RAPGEF3-218ENST00000548919 DCCP43146 1447 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 CHMP4BP1P59074 171 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 FAM193AP78312 1265 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 PPARAQ07869 468 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 ZNF174Q15697 407 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 PKN1Q16512 942 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 ZNF569Q5MCW4 686 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 CALCOCO1Q9P1Z2 691 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 BAZ2BQ9UIF8 2168 aaKnown RBP16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 FXR1P51114 621 aaKnown RBP eCLIP16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 ACRBPQ8NEB7 543 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
RAPGEF3-218ENST00000548919 CYP2D7A0A087X1C5 515 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 ATP8B1O43520 1251 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 CDC25AP30304 524 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 PBX1P40424 430 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 AATFQ9NY61 560 aaKnown RBP eCLIP16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 CTNND2Q9UQB3 1225 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 NUP98P52948 1817 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 MYH8P13535 1937 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 DOCK2Q92608 1830 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 PPP1R3GB7ZBB8 358 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 MFAP3LO75121 409 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 GYPCP04921 128 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 CDKAL1Q5VV42 579 aa16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
RAPGEF3-218ENST00000548919 H3BQF6 201 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 KIF5CO60282 957 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 IRX5P78411 483 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 SEC23AQ15436 765 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 ANKZF1Q9H8Y5 726 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 SLIT2O94813 1529 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 KRT2P35908 639 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 SH3RF1Q7Z6J0 888 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 TMTC2Q8N394 836 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 PNKPQ96T60 521 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
RAPGEF3-218ENST00000548919 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 GNAT2P19087 354 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 CYP7A1P22680 504 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 SUSD4Q5VX71 490 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 PHF20Q9BVI0 1012 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 MYH2Q9UKX2 1941 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 SLC35F6Q8N357 371 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 MCM6Q14566 821 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 WWC2Q6AWC2 1192 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 RASGRP2Q7LDG7 609 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 VPS16Q9H269 839 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 CDC23Q9UJX2 597 aa16.04■□□□□ 0.16
RAPGEF3-218ENST00000548919 RHOXF2BP0C7M4 288 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 FUT2Q10981 343 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 ZNF34Q8IZ26 560 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 RHOXF2Q9BQY4 288 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 NAA15Q9BXJ9 866 aaKnown RBP16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 MAPK8IP1Q9UQF2 711 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 ERVK-24P63145 666 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 EVX2Q03828 476 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms