RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 SMARCA5O60264 1052 aaPredicted RBP19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 CYP2D6P10635 497 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 MNX1P50219 401 aaPredicted RBP19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 TRIM32Q13049 653 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 LBX2Q6XYB7 198 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 CATSPERGQ6ZRH7 1159 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 CRNKL1Q9BZJ0 848 aaKnown RBP19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 PORCNQ9H237 461 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 PARP14Q460N5 1801 aa19.43■□□□□ 0.7
RAPGEF3-217ENST00000548434 H0YGN5 161 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 IGHA2P01877 340 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 ERVK-9P63128 1117 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 ERVK-24P63145 666 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 IRX3P78415 501 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 ABCB5Q2M3G0 1257 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 KIAA1755Q5JYT7 1200 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 MORN1Q5T089 497 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 GPRC5AQ8NFJ5 357 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 TRIM34Q9BYJ4 488 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 ARMT1Q9H993 441 aa19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 BIN2Q9UBW5 565 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-217ENST00000548434 XRCC5P13010 732 aaKnown RBP19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 CAPN2P17655 700 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 SEPT2Q15019 361 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 UBE3CQ15386 1083 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 SLC44A5Q8NCS7 719 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 TRIB2Q92519 343 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 GCC1Q96CN9 775 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 LRRCC1Q9C099 1032 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 PRO3102Q9H379 93 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 TAOK2Q9UL54 1235 aa19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 GREB1LQ9C091 1923 aaPredicted RBP19.41■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L15C9J2P7 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L13C9JLJ4 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L11C9JVI0 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L18D6R9N7 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L22D6RA61 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L17D6RBQ6 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L19D6RCP7 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L20D6RJB6 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 VCAM1P19320 739 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L24Q0WX57 530 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 DEFB118Q96PH6 123 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 ATP8A2Q9NTI2 1148 aa19.4■□□□□ 0.7
RAPGEF3-217ENST00000548434 A0A0G2JMZ2 1700 aa19.39■□□□□ 0.7
RAPGEF3-217ENST00000548434 MBD4O95243 580 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 HMGCRP04035 888 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 POLR3DP05423 398 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 RAB3GAP1Q15042 981 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 C12orf60Q5U649 245 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 GTF3C2Q8WUA4 911 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 DYNLL2Q96FJ2 89 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 PUS7LQ9H0K6 701 aaKnown RBP19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 BTBD7Q9P203 1132 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 COLQQ9Y215 455 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 RABGAP1Q9Y3P9 1069 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 PCDHB15Q9Y5E8 787 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 LAMA3Q16787 3333 aa19.39■□□□□ 0.69
RAPGEF3-217ENST00000548434 MAPK4P31152 587 aa19.38■□□□□ 0.69
RAPGEF3-217ENST00000548434 USP14P54578 494 aa19.38■□□□□ 0.69
RAPGEF3-217ENST00000548434 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.38■□□□□ 0.69
RAPGEF3-217ENST00000548434 RPTORQ8N122 1335 aa19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 CYP2D7A0A087X1C5 515 aa19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 SPDYE16A6NNV3 312 aaPredicted RBP19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 FARP2O94887 1054 aaPredicted RBP19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 ZYXQ15942 572 aaKnown RBP19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 GPR142Q7Z601 462 aa19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 ZNFX1Q9P2E3 1918 aaKnown RBP19.37■□□□□ 0.69
RAPGEF3-217ENST00000548434 AKR1B1P15121 316 aa19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 STRBPQ96SI9 672 aaKnown RBP19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 NUDT12Q9BQG2 462 aa19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 CABP5Q9NP86 173 aa19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 ECHDC1Q9NTX5 307 aa19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 SWAP70Q9UH65 585 aa19.36■□□□□ 0.69
RAPGEF3-217ENST00000548434 FRMPD3Q5JV73 1810 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 USP17L12C9JPN9 530 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 USP17L21D6R901 530 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 CYP2B6P20813 491 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 CDK8P49336 464 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 FXR1P51114 621 aaKnown RBP eCLIP19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 CCL14Q16627 93 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 CTR9Q6PD62 1173 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 C16orf86Q6ZW13 317 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 PLEKHH3Q7Z736 793 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 DIS3LQ8TF46 1054 aaKnown RBP19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 SOCS4Q8WXH5 440 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 RPAP3Q9H6T3 665 aaPredicted RBP19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 OGDHLQ9ULD0 1010 aa19.35■□□□□ 0.69
RAPGEF3-217ENST00000548434 CACNB2Q08289 660 aaPredicted RBP19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 LHX8Q68G74 356 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 TMEM179Q6ZVK1 233 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 CLEC10AQ8IUN9 316 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 KBTBD3Q8NAB2 608 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 OSBP2Q969R2 916 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 FEZ1Q99689 392 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 PAGR1Q9BTK6 254 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms