RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 IFT43Q96FT9 208 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 ADAMTS7Q9UKP4 1686 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 FLT4P35916 1363 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 TONSLQ96HA7 1378 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 ZBTB42B2RXF5 422 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 PSAPP07602 524 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 PDE6BP35913 854 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 CIAPIN1Q6FI81 312 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 KRTAP1-3Q8IUG1 177 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 PUS7Q96PZ0 661 aaKnown RBP9.3□□□□□ -0.92
CCDC59-203ENST00000548126 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 NARFQ9UHQ1 456 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 NCAPD2Q15021 1401 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 RNF123Q5XPI4 1314 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 ZNF541Q9H0D2 1346 aa9.3□□□□□ -0.92
CCDC59-203ENST00000548126 MKI67P46013 3256 aaKnown RBP9.29□□□□□ -0.92
CCDC59-203ENST00000548126 ROCK2O75116 1388 aaKnown RBP9.29□□□□□ -0.92
CCDC59-203ENST00000548126 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 CARMIL3Q8ND23 1372 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L10C9JJH3 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L21D6R901 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 GHRHP01286 108 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 PLAURQ03405 335 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
CCDC59-203ENST00000548126 SAPCD2Q86UD0 394 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 CACTIN-AS1Q8N1I8 211 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 TMEM130Q8N3G9 435 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 HHIPL1Q96JK4 782 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 BRIP1Q9BX63 1249 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
CCDC59-203ENST00000548126 SZT2Q5T011 3432 aa9.29□□□□□ -0.92
CCDC59-203ENST00000548126 SLX4Q8IY92 1834 aa9.28□□□□□ -0.92
CCDC59-203ENST00000548126 FYB1O15117 783 aa9.28□□□□□ -0.92
CCDC59-203ENST00000548126 FXR1P51114 621 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC59-203ENST00000548126 CABP4P57796 275 aa9.28□□□□□ -0.92
CCDC59-203ENST00000548126 MYO19Q96H55 970 aa9.28□□□□□ -0.92
CCDC59-203ENST00000548126 SOS1Q07889 1333 aaPredicted RBP9.28□□□□□ -0.92
CCDC59-203ENST00000548126 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
CCDC59-203ENST00000548126 FZD9O00144 591 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 TRAF5O00463 557 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 GSC2O15499 205 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 DEAF1O75398 565 aaPredicted RBP9.27□□□□□ -0.93
CCDC59-203ENST00000548126 EGFRP00533 1210 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 HSP90AB1P08238 724 aaKnown RBP9.27□□□□□ -0.93
CCDC59-203ENST00000548126 FSTP19883 344 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 GRNP28799 593 aaKnown RBP9.27□□□□□ -0.93
CCDC59-203ENST00000548126 LCE3BQ5TA77 95 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 HFE2Q6ZVN8 426 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
CCDC59-203ENST00000548126 GPC2Q8N158 579 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 PLD4Q96BZ4 506 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
CCDC59-203ENST00000548126 PPP1R12CQ9BZL4 782 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 MUC3BQ9H195 1237 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
CCDC59-203ENST00000548126 XYLBO75191 536 aa9.26□□□□□ -0.93
CCDC59-203ENST00000548126 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
CCDC59-203ENST00000548126 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
CCDC59-203ENST00000548126 CUL9Q8IWT3 2517 aa9.26□□□□□ -0.93
CCDC59-203ENST00000548126 WEE1P30291 646 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 FKBP4Q02790 459 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC59-203ENST00000548126 NOGQ13253 232 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 MCTP1Q6DN14 999 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 CTU1Q7Z7A3 348 aaKnown RBP9.25□□□□□ -0.93
CCDC59-203ENST00000548126 IL22RA1Q8N6P7 574 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 KRTAP4-12Q9BQ66 201 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
CCDC59-203ENST00000548126 SAGE1Q9NXZ1 904 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 CACNA1SQ13698 1873 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 TJP1Q07157 1748 aa9.25□□□□□ -0.93
CCDC59-203ENST00000548126 BTBD11A6QL63 1104 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 PAX4O43316 350 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 LGR5O75473 907 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 CELF2O95319 508 aaKnown RBP9.24□□□□□ -0.93
CCDC59-203ENST00000548126 SRGNP10124 158 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 LMOD1P29536 600 aaPredicted RBP9.24□□□□□ -0.93
CCDC59-203ENST00000548126 SOX18P35713 384 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 AKAP4Q5JQC9 854 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 GDF6Q6KF10 455 aaPredicted RBP9.24□□□□□ -0.93
CCDC59-203ENST00000548126 USP50Q70EL3 339 aaPredicted RBP9.24□□□□□ -0.93
CCDC59-203ENST00000548126 DNAJC10Q8IXB1 793 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 CMTR1Q8N1G2 835 aaKnown RBP9.24□□□□□ -0.93
CCDC59-203ENST00000548126 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 COL11A2P13942 1736 aaPredicted RBP9.24□□□□□ -0.93
CCDC59-203ENST00000548126 COL15A1P39059 1388 aa9.24□□□□□ -0.93
CCDC59-203ENST00000548126 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms