RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 CERS3Q8IU89 383 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 LCORLQ8N3X6 602 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 ARMT1Q9H993 441 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 DDX4Q9NQI0 724 aaKnown RBP14.42□□□□□ -0.1
HDAC7-226ENST00000547259 GINM1Q9NU53 330 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 PI4KBQ9UBF8 816 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 GABRQQ9UN88 632 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 MYH1P12882 1939 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 BAZ2AQ9UIF9 1905 aaKnown RBP14.41□□□□□ -0.1
HDAC7-226ENST00000547259 GPAA1O43292 621 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 EVI5O60447 810 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 INHAP05111 366 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 CAP2P40123 477 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 MFAP1P55081 439 aaKnown RBP14.41□□□□□ -0.1
HDAC7-226ENST00000547259 SPP2Q13103 211 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 ANKRD13CQ8N6S4 541 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 ANKLE1Q8NAG6 615 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
HDAC7-226ENST00000547259 UNC93B1Q9H1C4 597 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 LAMA4Q16363 1823 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 ATAD5Q96QE3 1844 aa14.41□□□□□ -0.1
HDAC7-226ENST00000547259 SGSM2O43147 1006 aa14.4□□□□□ -0.1
HDAC7-226ENST00000547259 ASNSP08243 561 aa14.4□□□□□ -0.1
HDAC7-226ENST00000547259 PPP4CP60510 307 aa14.4□□□□□ -0.1
HDAC7-226ENST00000547259 ZNF589Q86UQ0 364 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-226ENST00000547259 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-226ENST00000547259 TEX11Q8IYF3 940 aa14.4□□□□□ -0.1
HDAC7-226ENST00000547259 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-226ENST00000547259 DEFB118Q96PH6 123 aa14.4□□□□□ -0.1
HDAC7-226ENST00000547259 CRNKL1Q9BZJ0 848 aaKnown RBP14.4□□□□□ -0.1
HDAC7-226ENST00000547259 PAK6Q9NQU5 681 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-226ENST00000547259 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
HDAC7-226ENST00000547259 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 ELNP15502 786 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 SH3D19Q5HYK7 790 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 TRIM34Q9BYJ4 488 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 CRISPLD2Q9H0B8 497 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 IL25Q9H293 177 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 TMOD4Q9NZQ9 345 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
HDAC7-226ENST00000547259 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
HDAC7-226ENST00000547259 LOC285556D6RIA3 1793 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 HMGCRP04035 888 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 GNAT2P19087 354 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 USP5P45974 858 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 TRMT44Q8IYL2 757 aaKnown RBP14.38□□□□□ -0.11
HDAC7-226ENST00000547259 GTF3C2Q8WUA4 911 aaPredicted RBP14.38□□□□□ -0.11
HDAC7-226ENST00000547259 STRBPQ96SI9 672 aaKnown RBP14.38□□□□□ -0.11
HDAC7-226ENST00000547259 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
HDAC7-226ENST00000547259 SLC4A4Q9Y6R1 1079 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 RPTORQ8N122 1335 aa14.38□□□□□ -0.11
HDAC7-226ENST00000547259 APPP05067 770 aa14.37□□□□□ -0.11
HDAC7-226ENST00000547259 HMGCS2P54868 508 aa14.37□□□□□ -0.11
HDAC7-226ENST00000547259 BACE1P56817 501 aa14.37□□□□□ -0.11
HDAC7-226ENST00000547259 IRX3P78415 501 aaPredicted RBP14.37□□□□□ -0.11
HDAC7-226ENST00000547259 TREML2Q5T2D2 321 aa14.37□□□□□ -0.11
HDAC7-226ENST00000547259 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC7-226ENST00000547259 ASCC2Q9H1I8 757 aaPredicted RBP14.37□□□□□ -0.11
HDAC7-226ENST00000547259 ANO2Q9NQ90 1003 aa14.37□□□□□ -0.11
HDAC7-226ENST00000547259 MORF4L1Q9UBU8 362 aa14.37□□□□□ -0.11
HDAC7-226ENST00000547259 PRKAB2O43741 272 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
HDAC7-226ENST00000547259 REC8O95072 547 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 HOXA7P31268 230 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-226ENST00000547259 VPS53Q5VIR6 699 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 CCAR1Q8IX12 1150 aaKnown RBP14.36□□□□□ -0.11
HDAC7-226ENST00000547259 CRACR2BQ8N4Y2 399 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-226ENST00000547259 TGFBRAP1Q8WUH2 860 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 DDRGK1Q96HY6 314 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 MYH8P13535 1937 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 FLT1P17948 1338 aa14.36□□□□□ -0.11
HDAC7-226ENST00000547259 HLA-DOAP06340 250 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
HDAC7-226ENST00000547259 TDO2P48775 406 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 SOCS4Q8WXH5 440 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 PAWRQ96IZ0 340 aaKnown RBP14.35□□□□□ -0.11
HDAC7-226ENST00000547259 NUDT12Q9BQG2 462 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
HDAC7-226ENST00000547259 SIPA1L1O43166 1804 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 FAM196BA6NMK8 535 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 PATL2C9JE40 543 aaKnown RBP14.34□□□□□ -0.11
HDAC7-226ENST00000547259 USP17L10C9JJH3 530 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
HDAC7-226ENST00000547259 MAPK4P31152 587 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 CCDC84Q86UT8 332 aaPredicted RBP14.34□□□□□ -0.11
HDAC7-226ENST00000547259 METTL16Q86W50 562 aaKnown RBP14.34□□□□□ -0.11
HDAC7-226ENST00000547259 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms