RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SHISA4Q96DD7 197 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 EEF2KMTQ96G04 330 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 CSRNP2Q9H175 543 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 MAPK8IP1Q9UQF2 711 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 PCDHA5Q9Y5H7 936 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 MYH13Q9UKX3 1938 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 MMP10P09238 476 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 CMA1P23946 247 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 TROAPQ12815 778 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 USP17L2Q6R6M4 530 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 TMC6Q7Z403 805 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 KIAA0825Q8IV33 1275 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 RBM17Q96I25 401 aaKnown RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 TRIM75PA6NK02 468 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 PROM2Q8N271 834 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 CACTINQ8WUQ7 758 aaKnown RBP14.59□□□□□ -0.07
SCAF11-209ENST00000547018 BRIP1Q9BX63 1249 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 PRR29P0C7W0 189 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 IQCB1Q15051 598 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 TICAM2Q86XR7 235 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 TMX4Q9H1E5 349 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-209ENST00000547018 ANKRD36CQ5JPF3 1778 aa14.59□□□□□ -0.07
SCAF11-209ENST00000547018 FRMPD2Q68DX3 1309 aaPredicted RBP14.58□□□□□ -0.07
SCAF11-209ENST00000547018 KRT2P35908 639 aa14.58□□□□□ -0.07
SCAF11-209ENST00000547018 PTPAQ15257 358 aa14.58□□□□□ -0.07
SCAF11-209ENST00000547018 LRRC47Q8N1G4 583 aaKnown RBP14.58□□□□□ -0.07
SCAF11-209ENST00000547018 FBXL16Q8N461 479 aa14.58□□□□□ -0.07
SCAF11-209ENST00000547018 BLZF1Q9H2G9 400 aa14.58□□□□□ -0.07
SCAF11-209ENST00000547018 PCDHAC2Q9Y5I4 1007 aa14.58□□□□□ -0.07
SCAF11-209ENST00000547018 RTL9Q8NET4 1388 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 CFAP100Q494V2 611 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 DHX40Q8IX18 779 aaKnown RBP14.58□□□□□ -0.08
SCAF11-209ENST00000547018 TBC1D16Q8TBP0 767 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 BRMS1Q9HCU9 246 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 TTF2Q9UNY4 1162 aaKnown RBP14.58□□□□□ -0.08
SCAF11-209ENST00000547018 SPATA31A6Q5VVP1 1343 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 HS1BP3Q53T59 392 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 ATL3Q6DD88 541 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 XPO4Q9C0E2 1151 aaKnown RBP14.58□□□□□ -0.08
SCAF11-209ENST00000547018 ATP8A2Q9NTI2 1148 aa14.58□□□□□ -0.08
SCAF11-209ENST00000547018 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-209ENST00000547018 ATRNO75882 1429 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 PKN1Q16512 942 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 TPD52L1Q16890 204 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-209ENST00000547018 MAP3K14Q99558 947 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 TMX1Q9H3N1 280 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 U2AF2P26368 475 aaKnown RBP eCLIP14.57□□□□□ -0.085e-8■■■■■ 30.4
SCAF11-209ENST00000547018 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-209ENST00000547018 FOXP4Q8IVH2 680 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-209ENST00000547018 FAM177A1Q8N128 213 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-209ENST00000547018 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 TDRD7Q8NHU6 1098 aaKnown RBP14.57□□□□□ -0.08
SCAF11-209ENST00000547018 LEMD3Q9Y2U8 911 aa14.57□□□□□ -0.08
SCAF11-209ENST00000547018 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 PES1O00541 588 aaKnown RBP14.56□□□□□ -0.08
SCAF11-209ENST00000547018 PTGDRQ13258 359 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 EYA3Q99504 573 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 GPCPD1Q9NPB8 672 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 CHRNA5P30532 468 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 METTL16Q86W50 562 aaKnown RBP14.56□□□□□ -0.08
SCAF11-209ENST00000547018 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 ARPP21Q9UBL0 812 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-209ENST00000547018 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
SCAF11-209ENST00000547018 ZNF500O60304 480 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-209ENST00000547018 LDHCP07864 332 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 RILPL1Q5EBL4 403 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 C12orf60Q5U649 245 aa14.56□□□□□ -0.08
SCAF11-209ENST00000547018 DPP8Q6V1X1 898 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-209ENST00000547018 PPEF1O14829 653 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-209ENST00000547018 TMTC3Q6ZXV5 915 aa14.55□□□□□ -0.08
SCAF11-209ENST00000547018 FANCLQ9NW38 375 aa14.55□□□□□ -0.08
SCAF11-209ENST00000547018 SEMA3EO15041 775 aa14.55□□□□□ -0.08
SCAF11-209ENST00000547018 INF2Q27J81 1249 aa14.55□□□□□ -0.08
SCAF11-209ENST00000547018 RBM43Q6ZSC3 357 aaKnown RBP14.55□□□□□ -0.08
SCAF11-209ENST00000547018 CPLX3Q8WVH0 158 aa14.55□□□□□ -0.08
SCAF11-209ENST00000547018 DDX60Q8IY21 1712 aaKnown RBP14.55□□□□□ -0.08
SCAF11-209ENST00000547018 PP2D1A8MPX8 630 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 SKILP12757 684 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 SCG2P13521 617 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 RCSD1Q6JBY9 416 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 KRBA2Q6ZNG9 492 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 SYMPKQ92797 1274 aaKnown RBP14.54□□□□□ -0.08
SCAF11-209ENST00000547018 RNF26Q9BY78 433 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-209ENST00000547018 CUTAO60888 179 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 CDK8P49336 464 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 TMEM47Q9BQJ4 181 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 CCDC194A0A1B0GVG4 234 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 TULP1O00294 542 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-209ENST00000547018 TPM4P67936 248 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 JAKMIP3Q5VZ66 844 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 DPF2Q92785 391 aa14.54□□□□□ -0.08
SCAF11-209ENST00000547018 NRAPQ86VF7 1730 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 USP27XA6NNY8 438 aa14.53□□□□□ -0.08
SCAF11-209ENST00000547018 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms