RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 SUPT20HL1Q3ZLR7 823 aa13.3□□□□□ -0.28
CHERP-203ENST00000546361 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
CHERP-203ENST00000546361 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
CHERP-203ENST00000546361 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
CHERP-203ENST00000546361 COA1Q9GZY4 146 aa13.3□□□□□ -0.28
CHERP-203ENST00000546361 CRB1P82279 1406 aa13.3□□□□□ -0.28
CHERP-203ENST00000546361 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
CHERP-203ENST00000546361 ZNF202O95125 648 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 DYMQ7RTS9 669 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 GLG1Q92896 1179 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 MROH2AA6NES4 1674 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 BTBD18B2RXH4 712 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 ACTN2P35609 894 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 PABPC4Q13310 644 aaKnown RBP eCLIP13.29□□□□□ -0.282e-14■■□□□ 11.9
CHERP-203ENST00000546361 SLC27A3Q5K4L6 730 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 TMCO3Q6UWJ1 677 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 BLIDQ8IZY5 108 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 CELF1Q92879 486 aaKnown RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 LUC7L2Q9Y383 392 aaKnown RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 PPP1R2P41236 205 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 TBC1D8BQ0IIM8 1120 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 NAA15Q9BXJ9 866 aaKnown RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 MRPL11Q9Y3B7 192 aaKnown RBP13.29□□□□□ -0.28
CHERP-203ENST00000546361 AGLP35573 1532 aa13.29□□□□□ -0.28
CHERP-203ENST00000546361 NBPF26B4DH59 902 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 CETN3O15182 167 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 GAS7O60861 476 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 SCG2P13521 617 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 POLA2Q14181 598 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 NBPF10Q6P3W6 841 aaKnown RBP13.28□□□□□ -0.28
CHERP-203ENST00000546361 LCORLQ8N3X6 602 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 NBPF15Q8N660 670 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 RGS22Q8NE09 1264 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 LSG1Q9H089 658 aaKnown RBP13.28□□□□□ -0.28
CHERP-203ENST00000546361 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 COL15A1P39059 1388 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 H0YHG0 523 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 PFKFB2O60825 505 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 VPS72Q15906 364 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 CNNM4Q6P4Q7 775 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 EHBP1Q8NDI1 1231 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 GBP2P32456 591 aaPredicted RBP13.28□□□□□ -0.28
CHERP-203ENST00000546361 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 TAOK3Q9H2K8 898 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 ATP10DQ9P241 1426 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
CHERP-203ENST00000546361 INF2Q27J81 1249 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.28
CHERP-203ENST00000546361 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
CHERP-203ENST00000546361 NRXN1Q9ULB1 1477 aa13.27□□□□□ -0.28
CHERP-203ENST00000546361 GPATCH4Q5T3I0 446 aaKnown RBP13.27□□□□□ -0.28
CHERP-203ENST00000546361 TPH2Q8IWU9 490 aa13.27□□□□□ -0.28
CHERP-203ENST00000546361 TTC12Q9H892 705 aaPredicted RBP13.27□□□□□ -0.28
CHERP-203ENST00000546361 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.28
CHERP-203ENST00000546361 NEXMIFQ5QGS0 1516 aa13.27□□□□□ -0.28
CHERP-203ENST00000546361 CLTCQ00610 1675 aaKnown RBP13.27□□□□□ -0.28
CHERP-203ENST00000546361 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 KIF5AQ12840 1032 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 RAPGEF1Q13905 1077 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 NFIXQ14938 502 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 SMIM5Q71RC9 77 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 CABP7Q86V35 215 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 CSGALNACT2Q8N6G5 542 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 CCDC113Q9H0I3 377 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 ZC3H13Q5T200 1668 aaKnown RBP13.27□□□□□ -0.29
CHERP-203ENST00000546361 GDF11O95390 407 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHERP-203ENST00000546361 MECOMQ03112 1051 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 MAP9Q49MG5 647 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 APOA5Q6Q788 366 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 VPS16Q9H269 839 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 DHX36Q9H2U1 1008 aaKnown RBP13.27□□□□□ -0.29
CHERP-203ENST00000546361 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 PI4KBQ9UBF8 816 aa13.27□□□□□ -0.29
CHERP-203ENST00000546361 SETBP1Q9Y6X0 1596 aa13.26□□□□□ -0.29
CHERP-203ENST00000546361 PRR16Q569H4 304 aa13.26□□□□□ -0.29
CHERP-203ENST00000546361 SWAP70Q9UH65 585 aa13.26□□□□□ -0.29
CHERP-203ENST00000546361 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms