RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
RTN3-214ENST00000545432 NPLOC4Q8TAT6 608 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
RTN3-214ENST00000545432 FAM161BQ96MY7 647 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 KIAA1683Q9H0B3 1180 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 MAST2Q6P0Q8 1798 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 LAMA2P24043 3122 aaKnown RBP18.1■□□□□ 0.49
RTN3-214ENST00000545432 CYBAP13498 195 aa18.1■□□□□ 0.49
RTN3-214ENST00000545432 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
RTN3-214ENST00000545432 SLC39A5Q6ZMH5 540 aa18.1■□□□□ 0.49
RTN3-214ENST00000545432 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
RTN3-214ENST00000545432 NOL10Q9BSC4 688 aaKnown RBP18.1■□□□□ 0.49
RTN3-214ENST00000545432 TTYH1Q9H313 450 aaPredicted RBP18.1■□□□□ 0.49
RTN3-214ENST00000545432 BTBD7Q9P203 1132 aa18.1■□□□□ 0.49
RTN3-214ENST00000545432 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
RTN3-214ENST00000545432 ATN1P54259 1190 aaPredicted RBP18.09■□□□□ 0.49
RTN3-214ENST00000545432 USP14P54578 494 aa18.09■□□□□ 0.49
RTN3-214ENST00000545432 ATP2B2Q01814 1243 aa18.09■□□□□ 0.49
RTN3-214ENST00000545432 C9orf50Q5SZB4 431 aa18.09■□□□□ 0.49
RTN3-214ENST00000545432 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
RTN3-214ENST00000545432 CRACR2BQ8N4Y2 399 aaPredicted RBP18.09■□□□□ 0.49
RTN3-214ENST00000545432 MAFAQ8NHW3 353 aaPredicted RBP18.09■□□□□ 0.49
RTN3-214ENST00000545432 FRMPD3Q5JV73 1810 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 TMEM265A0A087WTH1 108 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 GH2P01242 217 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 CYP2C19P33261 490 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 ATF7IPQ6VMQ6 1270 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 ARRDC4Q8NCT1 418 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 EHD4Q9H223 541 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 PRKAG2Q9UGJ0 569 aa18.08■□□□□ 0.48
RTN3-214ENST00000545432 SPDYE16A6NNV3 312 aaPredicted RBP18.07■□□□□ 0.48
RTN3-214ENST00000545432 STRNO43815 780 aa18.07■□□□□ 0.48
RTN3-214ENST00000545432 HLA-DOAP06340 250 aa18.07■□□□□ 0.48
RTN3-214ENST00000545432 VCAM1P19320 739 aa18.07■□□□□ 0.48
RTN3-214ENST00000545432 LTBP2Q14767 1821 aa18.07■□□□□ 0.48
RTN3-214ENST00000545432 DNAH12Q6ZR08 3092 aa18.07■□□□□ 0.48
RTN3-214ENST00000545432 CDH23Q9H251 3354 aa18.07■□□□□ 0.48
RTN3-214ENST00000545432 RLFQ13129 1914 aa18.06■□□□□ 0.48
RTN3-214ENST00000545432 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
RTN3-214ENST00000545432 G3BP1Q13283 466 aaKnown RBP eCLIP18.06■□□□□ 0.48
RTN3-214ENST00000545432 TRIM34Q9BYJ4 488 aa18.06■□□□□ 0.48
RTN3-214ENST00000545432 FOCADQ5VW36 1801 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 TRIM43BA6NCK2 446 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 SEPT4O43236 478 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 RARSP54136 660 aaKnown RBP18.05■□□□□ 0.48
RTN3-214ENST00000545432 GJC2Q5T442 439 aaPredicted RBP18.05■□□□□ 0.48
RTN3-214ENST00000545432 CERS3Q8IU89 383 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 SHCBP1Q8NEM2 672 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 ACER1Q8TDN7 264 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 BADQ92934 168 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 TRIM43Q96BQ3 446 aaPredicted RBP18.05■□□□□ 0.48
RTN3-214ENST00000545432 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 SNRKQ9NRH2 765 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 NDUFB9Q9Y6M9 179 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 IVNS1ABPQ9Y6Y0 642 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 EYSQ5T1H1 3165 aa18.05■□□□□ 0.48
RTN3-214ENST00000545432 CNGA1P29973 690 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 DYNLL1P63167 89 aaKnown RBP18.04■□□□□ 0.48
RTN3-214ENST00000545432 TNNI3KQ59H18 835 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 MYLIPQ8WY64 445 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
RTN3-214ENST00000545432 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
RTN3-214ENST00000545432 SAP30BPQ9UHR5 308 aaKnown RBP18.04■□□□□ 0.48
RTN3-214ENST00000545432 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 ATP11BQ9Y2G3 1177 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 FPGT-TNNI3KV9GXZ4 949 aa18.04■□□□□ 0.48
RTN3-214ENST00000545432 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 GNAI2P04899 355 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 POLA2Q14181 598 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 CCDC158Q5M9N0 1113 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 TMED8Q6PL24 325 aaPredicted RBP18.03■□□□□ 0.48
RTN3-214ENST00000545432 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 MOV10L1Q9BXT6 1211 aaKnown RBP18.03■□□□□ 0.48
RTN3-214ENST00000545432 PIH1D3Q9NQM4 214 aaKnown RBP18.03■□□□□ 0.48
RTN3-214ENST00000545432 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
RTN3-214ENST00000545432 MUC3AQ02505 3323 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 COBLO75128 1261 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 ADORA2AP29274 412 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 ZAP70P43403 619 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 GABPAQ06546 454 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 COG2Q14746 738 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 TRIM60Q495X7 471 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
RTN3-214ENST00000545432 TTC39AQ5SRH9 613 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 SH3RF1Q7Z6J0 888 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 ABRAQ8N0Z2 381 aa18.02■□□□□ 0.48
RTN3-214ENST00000545432 ZNF236Q9UL36 1845 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 KBTBD13C9JR72 458 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 SHMT1P34896 483 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 LRRC41Q15345 812 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
RTN3-214ENST00000545432 ABCB5Q2M3G0 1257 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 DPP9Q86TI2 863 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 TTC6Q86TZ1 520 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 FEZ1Q99689 392 aa18.01■□□□□ 0.47
RTN3-214ENST00000545432 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
RTN3-214ENST00000545432 PHF24Q9UPV7 400 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms