RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 SLC3A2P08195 630 aaKnown RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 FUT2Q10981 343 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 NTRK3Q16288 839 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 FOXP4Q8IVH2 680 aaPredicted RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 NSUN7Q8NE18 718 aaKnown RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 PKNOX2Q96KN3 472 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 DEFB129Q9H1M3 183 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 ADARB2Q9NS39 739 aaKnown RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 TMOD2Q9NZR1 351 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 SWAP70Q9UH65 585 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 ZDHHC9Q9Y397 364 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 ATP6V1DQ9Y5K8 247 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 WDR33Q9C0J8 1336 aaKnown RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 GOLGA8BA8MQT2 603 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 TBC1D12O60347 775 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 MBD3O95983 291 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 HLA-DOAP06340 250 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 FDPSP14324 419 aaKnown RBP8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 RXRAP19793 462 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 RCAN1P53805 252 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 STK3Q13188 491 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 WTAPQ15007 396 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 DGKHQ86XP1 1220 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 AMOTL1Q8IY63 956 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 ZNF654Q8IZM8 581 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 UBAC1Q9BSL1 405 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 MKNK2Q9HBH9 465 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 MTMR4Q9NYA4 1195 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 PITPNM2Q9BZ72 1349 aa8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 UBE2Q2LH0YL09 131 aa8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 MYO1BO43795 1136 aa8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 BRD1O95696 1058 aa8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 NBPF12Q5TAG4 269 aaPredicted RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 ZSCAN29Q8IWY8 852 aaPredicted RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 ANP32BQ92688 251 aaKnown RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 TMEM47Q9BQJ4 181 aa8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 TAF1DQ9H5J8 278 aaPredicted RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 HERC5Q9UII4 1024 aaKnown RBP8.18□□□□□ -1.1
HMGCS2-204ENST00000544913 GDF11O95390 407 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 POTEIP0CG38 1075 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 POTEJP0CG39 1038 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 TSPY3P0CV98 308 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 TSPY8P0CW00 308 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 NCLP19338 710 aaKnown RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ADD1P35611 737 aaKnown RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 PRAMEF18Q5VWM3 479 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 MCTP1Q6DN14 999 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 NBPF11Q86T75 865 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 MICU3Q86XE3 530 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 IQCA1Q86XH1 822 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 APOBEC3FQ8IUX4 373 aaKnown RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 CHMP4CQ96CF2 233 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 SHISA4Q96DD7 197 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 LMBRD1Q9NUN5 540 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 OTOFQ9HC10 1997 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ZBTB43O43298 467 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 XRCC6P12956 609 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 EPHX2P34913 555 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ZNF445P59923 1031 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 FGD1P98174 961 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 TNFAIP1Q13829 316 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 SEPT2Q15019 361 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 SART3Q15020 963 aaKnown RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 CSPP1Q1MSJ5 1256 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 IFIT1BQ5T764 474 aaKnown RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ZNF444Q8N0Y2 327 aaPredicted RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 FAM43AQ8N2R8 423 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 SYAP1Q96A49 352 aaPredicted RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 CCDC17Q96LX7 622 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ZNF287Q9HBT7 754 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ZNF112Q9UJU3 913 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 FZD1Q9UP38 647 aa8.17□□□□□ -1.1
HMGCS2-204ENST00000544913 ATAD5Q96QE3 1844 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 PTPDC1A2A3K4 754 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 DDAH1O94760 285 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 GH2P01242 217 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 SNHG28P0DPA3 235 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 METAP2P50579 478 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 CERKLQ49MI3 558 aaPredicted RBP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 USP50Q70EL3 339 aaPredicted RBP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 TMTC2Q8N394 836 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 CRACR2BQ8N4Y2 399 aaPredicted RBP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 FANCBQ8NB91 859 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms