RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 NELFBQ8WX92 580 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 EHMT1Q9H9B1 1298 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 GPHNQ9NQX3 736 aaPredicted RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 SPTLC3Q9NUV7 552 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 CPDO75976 1380 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 LOC102724428A0A0B4J2F2 783 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 PSDA5PKW4 1024 aaPredicted RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 PRKAB2O43741 272 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 PPP1R12BO60237 982 aaPredicted RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 CCNT1O60563 726 aaKnown RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 SIK1P57059 783 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 TUBB2AQ13885 445 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 SUSD4Q5VX71 490 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 CNBD1Q8NA66 436 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 STAG1Q8WVM7 1258 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 TUBB2BQ9BVA1 445 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 LMO7Q8WWI1 1683 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 MST1RQ04912 1400 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 hCG_1642624A0A1W2PR95 340 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 TOM1O60784 492 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 CYP19A1P11511 503 aaPredicted RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 IDEP14735 1019 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 LIFRP42702 1097 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 SKIDA1Q1XH10 827 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 TDRD12Q587J7 1177 aaKnown RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 CACTINQ8WUQ7 758 aaKnown RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 TSC1Q92574 1164 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 PLIN2Q99541 437 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS50-220ENST00000544910 RNF26Q9BY78 433 aaPredicted RBP6.52□□□□□ -1.37
VPS50-220ENST00000544910 TSGA10Q9BZW7 698 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 CSRNP2Q9H175 543 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 ARFGAP3Q9NP61 516 aa6.52□□□□□ -1.37
VPS50-220ENST00000544910 A0A087WWV3 80 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 GOLGA6L10A0A0M3HER8 536 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 ERFEQ4G0M1 354 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 FMR1NBQ8N0W7 255 aaPredicted RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 SYMPKQ92797 1274 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 STRBPQ96SI9 672 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 BLZF1Q9H2G9 400 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 TMOD2Q9NZR1 351 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 MAN1B1Q9UKM7 699 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 UFL1O94874 794 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 EVCP57679 992 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 ODF2Q5BJF6 829 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 CT47A1Q5JQC4 288 aaPredicted RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 FCHSD1Q86WN1 690 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 TEX11Q8IYF3 940 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 JADE2Q9NQC1 790 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 FANCLQ9NW38 375 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 THRAP3Q9Y2W1 955 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 SV2BQ7L1I2 683 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 KRT25Q7Z3Z0 450 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 NAP1L4Q99733 375 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 LY9Q9HBG7 655 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 ZSWIM5Q9P217 1185 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 TAF6LQ9Y6J9 622 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 SCG2P13521 617 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 IFNAR1P17181 557 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 FAM98CQ17RN3 349 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 ZNF512BQ96KM6 892 aaPredicted RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 VPS16Q9H269 839 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 SEPT11Q9NVA2 429 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 PPP2R2CQ9Y2T4 447 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 PLEKHG2Q9H7P9 1386 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 KIF28PB7ZC32 967 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 USP17L12C9JPN9 530 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 USP17L21D6R901 530 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 CHGBP05060 677 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 CNNM4Q6P4Q7 775 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 ERMNQ8TAM6 284 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 CCDC51Q96ER9 411 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 NAPGQ99747 312 aaPredicted RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 UBA5Q9GZZ9 404 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 LUC7L2Q9Y383 392 aaKnown RBP6.51□□□□□ -1.37
VPS50-220ENST00000544910 COL15A1P39059 1388 aa6.51□□□□□ -1.37
VPS50-220ENST00000544910 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 F8W031 263 aaPredicted RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 KRT86O43790 486 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 NF2P35240 595 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 MNAT1P51948 309 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 ADKP55263 362 aaKnown RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 RPS8P62241 208 aaKnown RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 TFAP4Q01664 338 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 PDE4DQ08499 809 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 KRT79Q5XKE5 535 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 BLIDQ8IZY5 108 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 AIFM3Q96NN9 605 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 KCNF1Q9H3M0 494 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 GGA1Q9UJY5 639 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 GUCA1BQ9UMX6 200 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 PRPF3O43395 683 aaKnown RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 PAFAH1B1P43034 410 aa6.5□□□□□ -1.37
VPS50-220ENST00000544910 DYNLL1P63167 89 aaKnown RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 TRIM28Q13263 835 aaKnown RBP6.5□□□□□ -1.37
VPS50-220ENST00000544910 MORC3Q14149 939 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms