RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 DPH2Q9BQC3 489 aaPredicted RBP3.78□□□□□ -1.8
YBX3-214ENST00000544501 SRRTQ9BXP5 876 aaKnown RBP3.78□□□□□ -1.8
YBX3-214ENST00000544501 PRDM5Q9NQX1 630 aaPredicted RBP3.78□□□□□ -1.8
YBX3-214ENST00000544501 KLHL3Q9UH77 587 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 PPT2Q9UMR5 302 aa3.78□□□□□ -1.8
YBX3-214ENST00000544501 CYP26A1O43174 497 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 COBLO75128 1261 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 GBP1P32455 592 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 KIR3DL1P43629 444 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 EIF6P56537 245 aaKnown RBP3.77□□□□□ -1.81
YBX3-214ENST00000544501 FBXW10Q5XX13 1052 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 PHACTR4Q8IZ21 702 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 C19orf47Q8N9M1 422 aaKnown RBP3.77□□□□□ -1.81
YBX3-214ENST00000544501 DNAJB8Q8NHS0 232 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 RIN3Q8TB24 985 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 XAGE3Q8WTP9 111 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 CPLX3Q8WVH0 158 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 SHDQ96IW2 340 aa3.77□□□□□ -1.81
YBX3-214ENST00000544501 HEXIM2Q96MH2 286 aaKnown RBP3.77□□□□□ -1.81
YBX3-214ENST00000544501 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.77□□□□□ -1.81
YBX3-214ENST00000544501 TPX2Q9ULW0 747 aaKnown RBP3.77□□□□□ -1.81
YBX3-214ENST00000544501 GNAT3A8MTJ3 354 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 TGFB1P01137 390 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 SSBP05455 408 aaKnown RBP eCLIP3.76□□□□□ -1.81
YBX3-214ENST00000544501 FGRP09769 529 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 ZNF865P0CJ78 1059 aaPredicted RBP3.76□□□□□ -1.81
YBX3-214ENST00000544501 GUCY2CP25092 1073 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 OXCT1P55809 520 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 SFRP5Q5T4F7 317 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 LSRQ86X29 649 aaPredicted RBP3.76□□□□□ -1.81
YBX3-214ENST00000544501 DHRS1Q96LJ7 313 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 FBXL18Q96ME1 805 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 KIF2CQ99661 725 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.76□□□□□ -1.812e-6■■□□□ 13.6
YBX3-214ENST00000544501 ASPNQ9BXN1 380 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 ANTXR1Q9H6X2 564 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 LRRC4CQ9HCJ2 640 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 SLC12A7Q9Y666 1083 aa3.76□□□□□ -1.81
YBX3-214ENST00000544501 COL17A1Q9UMD9 1497 aaPredicted RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 KIAA1324LA8MWY0 1029 aaPredicted RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 UBOX5O94941 541 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 ACRP10323 421 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 DNAJA1P31689 397 aaKnown RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 CD97P48960 835 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 CASP7P55210 303 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 CHMP4BP1P59074 171 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 RNF4P78317 190 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 IFI16Q16666 785 aaKnown RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 MSMPQ1L6U9 139 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 CCDC81Q6ZN84 652 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 ARHGAP27Q6ZUM4 889 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 CDH24Q86UP0 819 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 MCF2L2Q86YR7 1114 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 BAHD1Q8TBE0 780 aaPredicted RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 PIWIL2Q8TC59 973 aaKnown RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 NETO1Q8TDF5 533 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 RNF141Q8WVD5 230 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 VWCEQ96DN2 955 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 MISP3Q96FF7 219 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 KREMEN1Q96MU8 473 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 SLC9A7Q96T83 725 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 TNKS2Q9H2K2 1166 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 ZC3H7BQ9UGR2 993 aaKnown RBP3.75□□□□□ -1.81
YBX3-214ENST00000544501 SNX11Q9Y5W9 270 aa3.75□□□□□ -1.81
YBX3-214ENST00000544501 CNTNAP4Q9C0A0 1308 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 TMEM265A0A087WTH1 108 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 CLEC3AO75596 197 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 PRNPP04156 253 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 CEACAM5P06731 702 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 SPINK2P20155 84 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 HOXA10P31260 410 aaPredicted RBP3.74□□□□□ -1.81
YBX3-214ENST00000544501 CLCN7P51798 805 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 SF3A1Q15459 793 aaKnown RBP3.74□□□□□ -1.81
YBX3-214ENST00000544501 TNNI3KQ59H18 835 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 ZMYM1Q5SVZ6 1142 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 UNC5AQ6ZN44 842 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 DTX1Q86Y01 620 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 STK11IPQ8N1F8 1099 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 MFSD4AQ8N468 514 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 ARMC5Q96C12 935 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 BSDC1Q9NW68 430 aaPredicted RBP3.74□□□□□ -1.81
YBX3-214ENST00000544501 KCNH3Q9ULD8 1083 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 CAPN6Q9Y6Q1 641 aa3.74□□□□□ -1.81
YBX3-214ENST00000544501 FAM155AB1AL88 458 aaPredicted RBP3.73□□□□□ -1.81
YBX3-214ENST00000544501 ATP2B1P20020 1258 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 POLR2BP30876 1174 aaKnown RBP3.73□□□□□ -1.81
YBX3-214ENST00000544501 PMS1P54277 932 aaKnown RBP3.73□□□□□ -1.81
YBX3-214ENST00000544501 LRP8Q14114 963 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 NKPD1Q17RQ9 610 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 BBS9Q3SYG4 887 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 NBPF12Q5TAG4 269 aaPredicted RBP3.73□□□□□ -1.81
YBX3-214ENST00000544501 RUFY4Q6ZNE9 571 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 THAP5Q7Z6K1 395 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 TTC6Q86TZ1 520 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 SPACA3Q8IXA5 215 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 TMEM192Q8IY95 271 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 FAM181AQ8N9Y4 354 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 SMARCC1Q92922 1105 aaPredicted RBP3.73□□□□□ -1.81
YBX3-214ENST00000544501 ANAPC16Q96DE5 110 aa3.73□□□□□ -1.81
YBX3-214ENST00000544501 HRASLS5Q96KN8 279 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms