RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 DHX40Q8IX18 779 aaKnown RBP23.65■■□□□ 1.38
ME3-212ENST00000543262 CEP57L1Q8IYX8 460 aa23.65■■□□□ 1.38
ME3-212ENST00000543262 NLGN1Q8N2Q7 840 aa23.65■■□□□ 1.38
ME3-212ENST00000543262 CNTNAP5Q8WYK1 1306 aa23.65■■□□□ 1.38
ME3-212ENST00000543262 BAZ2BQ9UIF8 2168 aaKnown RBP23.65■■□□□ 1.38
ME3-212ENST00000543262 OFD1O75665 1012 aa23.64■■□□□ 1.38
ME3-212ENST00000543262 KRT2P35908 639 aa23.64■■□□□ 1.38
ME3-212ENST00000543262 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.38
ME3-212ENST00000543262 CERS3Q8IU89 383 aa23.64■■□□□ 1.38
ME3-212ENST00000543262 AKT1S1Q96B36 256 aa23.64■■□□□ 1.38
ME3-212ENST00000543262 NAT10Q9H0A0 1025 aaKnown RBP23.64■■□□□ 1.38
ME3-212ENST00000543262 BECN2A8MW95 431 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 PLSCR1O15162 318 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 APBA3O96018 575 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 ATP2B1P20020 1258 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 NT5C2P49902 561 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 ZRSR1Q15695 479 aaKnown RBP23.64■■□□□ 1.37
ME3-212ENST00000543262 DGKHQ86XP1 1220 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 KAT14Q9H8E8 782 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 ATP6V0A2Q9Y487 856 aa23.64■■□□□ 1.37
ME3-212ENST00000543262 GOLGA6L6A8MZA4 724 aa23.63■■□□□ 1.37
ME3-212ENST00000543262 SLC44A5Q8NCS7 719 aa23.63■■□□□ 1.37
ME3-212ENST00000543262 TBC1D22AQ8WUA7 517 aa23.63■■□□□ 1.37
ME3-212ENST00000543262 FBXO2Q9UK22 296 aaPredicted RBP23.63■■□□□ 1.37
ME3-212ENST00000543262 FAM205CA6NFA0 338 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 RIMBP2O15034 1052 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 KIAA2012Q0VF49 1180 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 DPCR1Q3MIW9 517 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 TEX11Q8IYF3 940 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 ANKS1AQ92625 1134 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 KCNH3Q9ULD8 1083 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 USP17L3A6NCW0 530 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 USP17L4A6NCW7 530 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 BIN1O00499 593 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 SRGNP10124 158 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 PTPREP23469 700 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 SPECC1Q5M775 1068 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 USP17L1Q7RTZ2 530 aa23.62■■□□□ 1.37
ME3-212ENST00000543262 ZNF444Q8N0Y2 327 aaPredicted RBP23.62■■□□□ 1.37
ME3-212ENST00000543262 FAM163AQ96GL9 167 aaPredicted RBP23.62■■□□□ 1.37
ME3-212ENST00000543262 NAP1L5Q96NT1 182 aaPredicted RBP23.62■■□□□ 1.37
ME3-212ENST00000543262 TPM3P06753 285 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 TSPY3P0CV98 308 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 TSPY8P0CW00 308 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 GRIN1Q05586 938 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 EARS2Q5JPH6 523 aaKnown RBP23.61■■□□□ 1.37
ME3-212ENST00000543262 NRXN2Q9P2S2 1712 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 FAM205AQ6ZU69 1335 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 KIF5BP33176 963 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 GTF2IP78347 998 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 SARM1Q6SZW1 724 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 SLF2Q8IX21 1173 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 AOPEPQ8N6M6 819 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 PNMA1Q8ND90 353 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 CEP131Q9UPN4 1083 aa23.61■■□□□ 1.37
ME3-212ENST00000543262 PLCG2P16885 1265 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 RHBDL3P58872 404 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 NLRP12P59046 1061 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 NPY5RQ15761 445 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 LONRF3Q496Y0 759 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 DRC7Q8IY82 874 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 SCG2P13521 617 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 OLFM4Q6UX06 510 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.6■■□□□ 1.37
ME3-212ENST00000543262 PIBF1Q8WXW3 757 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 KCNF1Q9H3M0 494 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 TCP11L1Q9NUJ3 509 aa23.6■■□□□ 1.37
ME3-212ENST00000543262 GAKO14976 1311 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 NPR1P16066 1061 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 RASA1P20936 1047 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 CCDC178Q5BJE1 867 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.59■■□□□ 1.37
ME3-212ENST00000543262 BRMS1Q9HCU9 246 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 FLT1P17948 1338 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 VEGFAP15692 232 aaPredicted RBP23.59■■□□□ 1.37
ME3-212ENST00000543262 PFKFB3Q16875 520 aaPredicted RBP23.59■■□□□ 1.37
ME3-212ENST00000543262 ZNF772Q68DY9 489 aaPredicted RBP23.59■■□□□ 1.37
ME3-212ENST00000543262 KRBA2Q6ZNG9 492 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 COA1Q9GZY4 146 aa23.59■■□□□ 1.37
ME3-212ENST00000543262 SRPRBQ9Y5M8 271 aaKnown RBP23.59■■□□□ 1.37
ME3-212ENST00000543262 MYH1P12882 1939 aa23.58■■□□□ 1.37
ME3-212ENST00000543262 TRIM75PA6NK02 468 aa23.58■■□□□ 1.37
ME3-212ENST00000543262 PNOCQ13519 176 aa23.58■■□□□ 1.37
ME3-212ENST00000543262 ZNF579Q8NAF0 562 aaKnown RBP23.58■■□□□ 1.37
ME3-212ENST00000543262 TNFRSF25Q93038 417 aa23.58■■□□□ 1.37
ME3-212ENST00000543262 BPIFA3Q9BQP9 254 aa23.58■■□□□ 1.37
ME3-212ENST00000543262 TUBE1Q9UJT0 475 aa23.58■■□□□ 1.37
ME3-212ENST00000543262 DDX60LQ5H9U9 1706 aaKnown RBP23.58■■□□□ 1.37
ME3-212ENST00000543262 NOM1Q5C9Z4 860 aaKnown RBP23.58■■□□□ 1.36
ME3-212ENST00000543262 CNNM3Q8NE01 707 aa23.58■■□□□ 1.36
ME3-212ENST00000543262 FAM13BQ9NYF5 915 aa23.58■■□□□ 1.36
ME3-212ENST00000543262 NRBP1Q9UHY1 535 aa23.58■■□□□ 1.36
ME3-212ENST00000543262 MMP10P09238 476 aa23.57■■□□□ 1.36
ME3-212ENST00000543262 PTGS1P23219 599 aa23.57■■□□□ 1.36
ME3-212ENST00000543262 CDK8P49336 464 aa23.57■■□□□ 1.36
ME3-212ENST00000543262 ISM2Q6H9L7 571 aa23.57■■□□□ 1.36
ME3-212ENST00000543262 METTL16Q86W50 562 aaKnown RBP23.57■■□□□ 1.36
ME3-212ENST00000543262 STAG2Q8N3U4 1231 aa23.57■■□□□ 1.36
ME3-212ENST00000543262 ZC3H12CQ9C0D7 883 aaKnown RBP23.57■■□□□ 1.36
ME3-212ENST00000543262 ZNF287Q9HBT7 754 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms