RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 PDILTQ8N807 584 aa6.4□□□□□ -1.38
ZEB1-209ENST00000542879 SHISA4Q96DD7 197 aa6.4□□□□□ -1.38
ZEB1-209ENST00000542879 STRBPQ96SI9 672 aaKnown RBP6.4□□□□□ -1.38
ZEB1-209ENST00000542879 TUBB2BQ9BVA1 445 aa6.4□□□□□ -1.38
ZEB1-209ENST00000542879 ADD3Q9UEY8 706 aaKnown RBP6.4□□□□□ -1.38
ZEB1-209ENST00000542879 HOOK1Q9UJC3 728 aaKnown RBP6.4□□□□□ -1.38
ZEB1-209ENST00000542879 L1RE1Q9UN81 338 aa6.4□□□□□ -1.38
ZEB1-209ENST00000542879 ITIH6Q6UXX5 1313 aa6.4□□□□□ -1.38
ZEB1-209ENST00000542879 BAZ2AQ9UIF9 1905 aaKnown RBP6.4□□□□□ -1.38
ZEB1-209ENST00000542879 ERVV-2B6SEH9 535 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 SEMA3EO15041 775 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 RPS6KA5O75582 802 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 CD44P16070 742 aaKnown RBP6.4□□□□□ -1.39
ZEB1-209ENST00000542879 SSRP1Q08945 709 aaKnown RBP6.4□□□□□ -1.39
ZEB1-209ENST00000542879 RBL2Q08999 1139 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 ZSCAN26Q16670 478 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 GOLGA5Q8TBA6 731 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 MYL10Q9BUA6 226 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 SLC26A6Q9BXS9 759 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 INCENPQ9NQS7 918 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 ZSWIM5Q9P217 1185 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 TBC1D2BQ9UPU7 963 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 PCDHB6Q9Y5E3 794 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 CDHR2Q9BYE9 1310 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 ZNF532Q9HCE3 1301 aa6.4□□□□□ -1.39
ZEB1-209ENST00000542879 MFAP3LO75121 409 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 GYS2P54840 703 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 GNL2Q13823 731 aaKnown RBP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TRIM29Q14134 588 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TTF1Q15361 905 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 SPATA1Q5VX52 437 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 KANK3Q6NY19 840 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 USP49Q70CQ1 688 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 CADPS2Q86UW7 1296 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 DIS3L2Q8IYB7 885 aaKnown RBP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 CEP112Q8N8E3 955 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TRIM34Q9BYJ4 488 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 STRN4Q9NRL3 753 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 ZNF335Q9H4Z2 1342 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 POTEB2H3BUK9 544 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 PDE6AP16499 860 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 GPS2Q13227 327 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TMEM67Q5HYA8 995 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TMED8Q6PL24 325 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 ZBTB38Q8NAP3 1195 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 WASF1Q92558 559 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 AATFQ9NY61 560 aaKnown RBP eCLIP6.39□□□□□ -1.39
ZEB1-209ENST00000542879 WWC3Q9ULE0 1092 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 PPP1R3GB7ZBB8 358 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 GYPCP04921 128 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 ARHGAP25P42331 645 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 RCAN1P53805 252 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TUBB4BP68371 445 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 AMPD2Q01433 879 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 TTLL11Q8NHH1 800 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 CSRNP2Q9H175 543 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 LCMT1Q9UIC8 334 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 KCNJ14Q9UNX9 436 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 SPATA31A3Q5VYP0 1347 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 PCDH11XQ9BZA7 1347 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 PCDH11YQ9BZA8 1340 aa6.39□□□□□ -1.39
ZEB1-209ENST00000542879 ABL1P00519 1130 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 ACTN2P35609 894 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 ERVK-24P63145 666 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 DPYDQ12882 1025 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 NR5A1Q13285 461 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 CRACR2BQ8N4Y2 399 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-209ENST00000542879 IGSF22Q8N9C0 903 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 CCDC51Q96ER9 411 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 PDE11AQ9HCR9 933 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 CACNA1SQ13698 1873 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 LRRC10BA6NIK2 292 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
ZEB1-209ENST00000542879 FGFR2P21802 821 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 CTDSPL2Q05D32 466 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 IFIT5Q13325 482 aaKnown RBP6.38□□□□□ -1.39
ZEB1-209ENST00000542879 HDXQ7Z353 690 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 IFNL3Q8IZI9 196 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 OXER1Q8TDS5 423 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 STAG1Q8WVM7 1258 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 AK7Q96M32 723 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 ABCB6Q9NP58 842 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 LZTFL1Q9NQ48 299 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 SLC12A7Q9Y666 1083 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 SYNRGQ9UMZ2 1314 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 N4BP1O75113 896 aaKnown RBP6.38□□□□□ -1.39
ZEB1-209ENST00000542879 DEXIO95424 95 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 FXR1P51114 621 aaKnown RBP eCLIP6.38□□□□□ -1.39
ZEB1-209ENST00000542879 AKNAD1Q5T1N1 836 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 NFXL1Q6ZNB6 911 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 SRLQ86TD4 932 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 SLC35F6Q8N357 371 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 FAM89AQ96GI7 184 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 PAGE5Q96GU1 130 aa6.38□□□□□ -1.39
ZEB1-209ENST00000542879 TTF2Q9UNY4 1162 aaKnown RBP6.38□□□□□ -1.39
ZEB1-209ENST00000542879 GSG1L2A8MUP6 293 aa6.37□□□□□ -1.39
ZEB1-209ENST00000542879 RNF225M0QZC1 329 aaPredicted RBP6.37□□□□□ -1.39
ZEB1-209ENST00000542879 MYO1CO00159 1063 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms