RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LONRF2Q1L5Z9 754 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 HGSNATQ68CP4 663 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 GDF6Q6KF10 455 aaPredicted RBP5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 DDX42Q86XP3 938 aaKnown RBP eCLIP5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 LRRC47Q8N1G4 583 aaKnown RBP5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 TMEM40Q8WWA1 233 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 SLC26A8Q96RN1 970 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 POP1Q99575 1024 aaKnown RBP5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 MCM8Q9UJA3 840 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 CUX2O14529 1486 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 A0A087X0B3 334 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 ADCY3O60266 1144 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 PDE8AO60658 829 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 SMNDC1O75940 238 aaKnown RBP eCLIP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 ALX3O95076 343 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 FSTP19883 344 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 NFKB2Q00653 900 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 PTPN11Q06124 597 aaPredicted RBP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 ZNF252P-AS1Q0IIN9 211 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 PABPC4Q13310 644 aaKnown RBP eCLIP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 ZNF423Q2M1K9 1284 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 SLC10A6Q3KNW5 377 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 ZC3H12BQ5HYM0 836 aaKnown RBP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 SCARA3Q6AZY7 606 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 VHLLQ6RSH7 139 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 Q6ZS46 218 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 RAVER1Q8IY67 606 aaKnown RBP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 CACTIN-AS1Q8N1I8 211 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 TAB3Q8N5C8 712 aaPredicted RBP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 IL22RA1Q8N6P7 574 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 ZBTB38Q8NAP3 1195 aaPredicted RBP5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 PMM1Q92871 262 aa5.26□□□□□ -1.57
SFSWAP-211ENST00000542813 CCDC163A0A0D9SF12 145 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 SUSD5O60279 629 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 HTR3BO95264 441 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 PMLP29590 882 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 FAM50AQ14320 339 aaKnown RBP5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 SETDB1Q15047 1291 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 CEP135Q66GS9 1140 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 ADAMTSL4Q6UY14 1074 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 WDR75Q8IWA0 830 aaKnown RBP5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 TSR2Q969E8 191 aaKnown RBP5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 RELTQ969Z4 430 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 PCGF6Q9BYE7 350 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 EPN3Q9H201 632 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 PHAXQ9H814 394 aaKnown RBP5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 GOLGA2P5Q9HBQ8 144 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 PCMTD2Q9NV79 361 aa5.25□□□□□ -1.57
SFSWAP-211ENST00000542813 PRR36Q9H6K5 1346 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 UNC13AQ9UPW8 1703 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 RFPL3O75679 317 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 EIF3JO75822 258 aaKnown RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 ALDH1L1O75891 902 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 EPHB1P54762 984 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 RHBDL3P58872 404 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 MLECQ14165 292 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 CBX2Q14781 532 aaPredicted RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 ZYXQ15942 572 aaKnown RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 MAP1SQ66K74 1059 aaPredicted RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 WWC2Q6AWC2 1192 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 MCTP1Q6DN14 999 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 OVOS1Q6IE37 1185 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 MPRIPQ6WCQ1 1025 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 UNC5AQ6ZN44 842 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 VN1R5Q7Z5H4 357 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 RNF180Q86T96 592 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 PDZD3Q86UT5 571 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 SMC5Q8IY18 1101 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 FAM9AQ8IZU1 332 aaPredicted RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 UBR7Q8N806 425 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 DDX54Q8TDD1 881 aaKnown RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 NCOA5Q9HCD5 579 aaKnown RBP5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 GMIPQ9P107 970 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 SOX13Q9UN79 622 aa5.24□□□□□ -1.57
SFSWAP-211ENST00000542813 GSC2O15499 205 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 ACRP10323 421 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 PTPRAP18433 802 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 CD97P48960 835 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 CDK8P49336 464 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 TTF1Q15361 905 aaPredicted RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 NFE2Q16621 373 aaPredicted RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 WIPI1Q5MNZ9 446 aaPredicted RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 AXDND1Q5T1B0 1012 aaPredicted RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 CCSAPQ6IQ19 270 aaPredicted RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 KIF2CQ99661 725 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 PCDHB10Q9UN67 800 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 TRIM33Q9UPN9 1127 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 MAPRE3Q9UPY8 281 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 RAXQ9Y2V3 346 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 EIF4G1Q04637 1599 aaKnown RBP5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 LTBP3Q9NS15 1303 aa5.23□□□□□ -1.57
SFSWAP-211ENST00000542813 GSG1L2A8MUP6 293 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 AGRPO00253 132 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 PLD2O14939 933 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 KIF3BO15066 747 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 TSPAN6O43657 245 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms