RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 DDX41Q9UJV9 622 aaKnown RBP5.77□□□□□ -1.49
LDHB-209ENST00000542765 POLR3KQ9Y2Y1 108 aaPredicted RBP5.77□□□□□ -1.49
LDHB-209ENST00000542765 CORINQ9Y5Q5 1042 aa5.77□□□□□ -1.49
LDHB-209ENST00000542765 ST14Q9Y5Y6 855 aa5.77□□□□□ -1.49
LDHB-209ENST00000542765 CAPN6Q9Y6Q1 641 aa5.77□□□□□ -1.49
LDHB-209ENST00000542765 PGRP06401 933 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 RANGAP1P46060 587 aaPredicted RBP5.76□□□□□ -1.49
LDHB-209ENST00000542765 ANGEL2Q5VTE6 544 aaKnown RBP5.76□□□□□ -1.49
LDHB-209ENST00000542765 SLC6A19Q695T7 634 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 LETMD1Q6P1Q0 360 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 KIAA0825Q8IV33 1275 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 MCATQ8IVS2 390 aaKnown RBP5.76□□□□□ -1.49
LDHB-209ENST00000542765 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 EAF1Q96JC9 268 aaPredicted RBP5.76□□□□□ -1.49
LDHB-209ENST00000542765 MIPEPQ99797 713 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 SPON2Q9BUD6 331 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 UBP1Q9NZI7 540 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 LMCD1Q9NZU5 365 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 ADAM30Q9UKF2 790 aa5.76□□□□□ -1.49
LDHB-209ENST00000542765 PRR36Q9H6K5 1346 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 GNAT3A8MTJ3 354 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 GRIN3BO60391 1043 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 TCF3P15923 654 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 PDE4BQ07343 736 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 CWF19L2Q2TBE0 894 aaKnown RBP5.75□□□□□ -1.49
LDHB-209ENST00000542765 TMEM201Q5SNT2 666 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 SFRP5Q5T4F7 317 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 OGFOD2Q6N063 350 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 ARHGAP27Q6ZUM4 889 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 POU5F2Q8N7G0 328 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 FLAD1Q8NFF5 587 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 DNAJB8Q8NHS0 232 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 PI4K2BQ8TCG2 481 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 PPP1R13LQ8WUF5 828 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 ACSF2Q96CM8 615 aaPredicted RBP5.75□□□□□ -1.49
LDHB-209ENST00000542765 TMEM87BQ96K49 555 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 NT5C1AQ9BXI3 368 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 ROBO2Q9HCK4 1378 aa5.75□□□□□ -1.49
LDHB-209ENST00000542765 PLCG1P19174 1290 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 APOBRQ0VD83 1088 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 SEZ6Q53EL9 994 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 ZNF654Q8IZM8 581 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 COX4I2Q96KJ9 171 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 HSPA12BQ96MM6 686 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 DPH2Q9BQC3 489 aaPredicted RBP5.74□□□□□ -1.49
LDHB-209ENST00000542765 RC3H2Q9HBD1 1191 aaKnown RBP5.74□□□□□ -1.49
LDHB-209ENST00000542765 BRMS1Q9HCU9 246 aa5.74□□□□□ -1.49
LDHB-209ENST00000542765 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.74□□□□□ -1.49
LDHB-209ENST00000542765 BIN1O00499 593 aa5.73□□□□□ -1.49
LDHB-209ENST00000542765 HTR3BO95264 441 aa5.73□□□□□ -1.49
LDHB-209ENST00000542765 ZNF746Q6NUN9 644 aaPredicted RBP5.73□□□□□ -1.49
LDHB-209ENST00000542765 THAP5Q7Z6K1 395 aa5.73□□□□□ -1.49
LDHB-209ENST00000542765 MFSD4AQ8N468 514 aa5.73□□□□□ -1.49
LDHB-209ENST00000542765 PRDM7Q9NQW5 492 aa5.73□□□□□ -1.49
LDHB-209ENST00000542765 REV1Q9UBZ9 1251 aa5.73□□□□□ -1.49
LDHB-209ENST00000542765 KIR3DL1P43629 444 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 ZP2Q05996 745 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 TNK2Q07912 1038 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 PAK2Q13177 524 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 IKZF1Q13422 519 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 CDH24Q86UP0 819 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 SLITRK4Q8IW52 837 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 NKD1Q969G9 470 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 Q96M66 194 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 TGIF2Q9GZN2 237 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 ATP13A1Q9HD20 1204 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 IGSF5Q9NSI5 407 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 TPX2Q9ULW0 747 aaKnown RBP5.72□□□□□ -1.49
LDHB-209ENST00000542765 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 PCDHB14Q9Y5E9 798 aa5.72□□□□□ -1.49
LDHB-209ENST00000542765 UPK3BL1B0FP48 263 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 UPK3BL2E5RIL1 263 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 DNAJA2O60884 412 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 ERCC5P28715 1186 aaPredicted RBP5.71□□□□□ -1.5
LDHB-209ENST00000542765 FAM13CQ8NE31 585 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 PIWIL2Q8TC59 973 aaKnown RBP5.71□□□□□ -1.5
LDHB-209ENST00000542765 XAGE3Q8WTP9 111 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 ACBD3Q9H3P7 528 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 KLHL3Q9UH77 587 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 CEP131Q9UPN4 1083 aa5.71□□□□□ -1.5
LDHB-209ENST00000542765 FAM155AB1AL88 458 aaPredicted RBP5.7□□□□□ -1.5
LDHB-209ENST00000542765 ATE1O95260 518 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 SRFP11831 508 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 MCM4P33991 863 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 CLCQ05315 142 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 GK5Q6ZS86 529 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 SLFN12Q8IYM2 578 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 REXO1Q8N1G1 1221 aaKnown RBP5.7□□□□□ -1.5
LDHB-209ENST00000542765 TMEM40Q8WWA1 233 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 DUSP15Q9H1R2 295 aaPredicted RBP5.7□□□□□ -1.5
LDHB-209ENST00000542765 CCSER2Q9H7U1 834 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 EHMT1Q9H9B1 1298 aa5.7□□□□□ -1.5
LDHB-209ENST00000542765 ESR1P03372 595 aa5.69□□□□□ -1.5
LDHB-209ENST00000542765 YBX3P16989 372 aaKnown RBP eCLIP5.69□□□□□ -1.53e-18■□□□□ 10.3
LDHB-209ENST00000542765 CYP7A1P22680 504 aa5.69□□□□□ -1.5
LDHB-209ENST00000542765 GJA8P48165 433 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms