RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 NUP88Q99567 741 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-208ENST00000542570 DCCP43146 1447 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 CDK8P49336 464 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 NDUFA8P51970 172 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 NOSTRINQ8IVI9 506 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 RBM28Q9NW13 759 aaKnown RBP11.53□□□□□ -0.56
TOP3A-208ENST00000542570 MRVI1Q9Y6F6 885 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 GUCY1A2P33402 732 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 CTR9Q6PD62 1173 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 UTYO14607 1347 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 ZMYM6O95789 1325 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 BCL9O00512 1426 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 CCT6AP40227 531 aaKnown RBP11.53□□□□□ -0.56
TOP3A-208ENST00000542570 NSUN4Q96CB9 384 aaKnown RBP11.53□□□□□ -0.56
TOP3A-208ENST00000542570 PIGSQ96S52 555 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 SERTAD1Q9UHV2 236 aa11.53□□□□□ -0.56
TOP3A-208ENST00000542570 MED23Q9ULK4 1368 aa11.52□□□□□ -0.56
TOP3A-208ENST00000542570 ECE2O60344 883 aa11.52□□□□□ -0.56
TOP3A-208ENST00000542570 PLCD1P51178 756 aa11.52□□□□□ -0.56
TOP3A-208ENST00000542570 ARID5AQ03989 594 aa11.52□□□□□ -0.56
TOP3A-208ENST00000542570 H7C1D1 291 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 TECP42680 631 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 ENAHQ8N8S7 591 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-208ENST00000542570 OXER1Q8TDS5 423 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 SCLT1Q96NL6 688 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 BRIP1Q9BX63 1249 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-208ENST00000542570 SCG2P13521 617 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 PFKFB1P16118 471 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 MRPL12P52815 198 aaKnown RBP11.52□□□□□ -0.57
TOP3A-208ENST00000542570 PTGDRQ13258 359 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-208ENST00000542570 PDCL3Q9H2J4 239 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 KCNQ5Q9NR82 932 aa11.52□□□□□ -0.57
TOP3A-208ENST00000542570 CASP1P29466 404 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 USP8P40818 1118 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 SKIDA1Q1XH10 827 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-208ENST00000542570 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 ADGRA1Q86SQ6 560 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.51□□□□□ -0.576e-9■■■■■ 134.6
TOP3A-208ENST00000542570 ALAS1P13196 640 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 CRKP46108 304 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 ZNHIT6Q9NWK9 470 aaKnown RBP11.51□□□□□ -0.57
TOP3A-208ENST00000542570 POLLQ9UGP5 575 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 GH2P01242 217 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 CCDC40Q4G0X9 1142 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
TOP3A-208ENST00000542570 REXO1Q8N1G1 1221 aaKnown RBP11.51□□□□□ -0.57
TOP3A-208ENST00000542570 PAGR1Q9BTK6 254 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 CBX8Q9HC52 389 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
TOP3A-208ENST00000542570 TNIP1Q15025 636 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
TOP3A-208ENST00000542570 SMYD4Q8IYR2 804 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-208ENST00000542570 STAG2Q8N3U4 1231 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 ABCC12Q96J65 1359 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 ADRA2BP18089 450 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 CYP4A11Q02928 519 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 MB21D2Q8IYB1 491 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-208ENST00000542570 IQUBQ8NA54 791 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 COA1Q9GZY4 146 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 VPS16Q9H269 839 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 TNNT1P13805 278 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
TOP3A-208ENST00000542570 UBE2SQ16763 222 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 SYCP3Q8IZU3 236 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 SEMA3EO15041 775 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 SEPT2Q15019 361 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
TOP3A-208ENST00000542570 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L5A8MUK1 530 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 CBFA2T2O43439 604 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 TDRD12Q587J7 1177 aaKnown RBP11.49□□□□□ -0.57
TOP3A-208ENST00000542570 CACNA2D4Q7Z3S7 1137 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 PIM2Q9P1W9 311 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 SALL3Q9BXA9 1300 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 EPB41L2O43491 1005 aaKnown RBP11.49□□□□□ -0.57
TOP3A-208ENST00000542570 HOXA13P31271 388 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-208ENST00000542570 ADCY7P51828 1080 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 KIF23Q02241 960 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-208ENST00000542570 EVX2Q03828 476 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 GINS2Q9Y248 185 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms