RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 REV1Q9UBZ9 1251 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 KLHL3Q9UH77 587 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 VAV3Q9UKW4 847 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 SNX11Q9Y5W9 270 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 PRR36Q9H6K5 1346 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 BTBD11A6QL63 1104 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 ETV3P41162 512 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 GJA8P48165 433 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 TNNI2P48788 182 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 CLCN7P51798 805 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 PRKCQQ04759 706 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 COL9A2Q14055 689 aaPredicted RBP5.16□□□□□ -1.58
USP28-210ENST00000542033 FBXW10Q5XX13 1052 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 C22orf34Q6ZV56 151 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 VPS37DQ86XT2 251 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 TP53INP2Q8IXH6 220 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 XAGE3Q8WTP9 111 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 ACSF2Q96CM8 615 aaPredicted RBP5.16□□□□□ -1.58
USP28-210ENST00000542033 HEXIM2Q96MH2 286 aaKnown RBP5.16□□□□□ -1.58
USP28-210ENST00000542033 FERD3LQ96RJ6 166 aa5.16□□□□□ -1.58
USP28-210ENST00000542033 DPH2Q9BQC3 489 aaPredicted RBP5.16□□□□□ -1.58
USP28-210ENST00000542033 FAM155AB1AL88 458 aaPredicted RBP5.15□□□□□ -1.59
USP28-210ENST00000542033 ATE1O95260 518 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 IMPDH2P12268 514 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 KIR3DL1P43629 444 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 CHMP4BP1P59074 171 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 CLCQ05315 142 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 LRRFIP1Q32MZ4 808 aaKnown RBP5.15□□□□□ -1.59
USP28-210ENST00000542033 FAM214BQ7L5A3 538 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 SLFN12Q8IYM2 578 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 MFSD4AQ8N468 514 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 RASGRP4Q8TDF6 673 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 CYB5D2Q8WUJ1 264 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 BCL7CQ8WUZ0 217 aaPredicted RBP5.15□□□□□ -1.59
USP28-210ENST00000542033 ASB11Q8WXH4 323 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 TNKS2Q9H2K2 1166 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 EHMT1Q9H9B1 1298 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 GINM1Q9NU53 330 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 EFR3BQ9Y2G0 817 aa5.15□□□□□ -1.59
USP28-210ENST00000542033 TTBK1Q5TCY1 1321 aaPredicted RBP5.15□□□□□ -1.59
USP28-210ENST00000542033 ZNF865P0CJ78 1059 aaPredicted RBP5.14□□□□□ -1.59
USP28-210ENST00000542033 IRAK1P51617 712 aa5.14□□□□□ -1.59
USP28-210ENST00000542033 AOC3Q16853 763 aa5.14□□□□□ -1.59
USP28-210ENST00000542033 PHACTR4Q8IZ21 702 aa5.14□□□□□ -1.59
USP28-210ENST00000542033 CPLX3Q8WVH0 158 aa5.14□□□□□ -1.59
USP28-210ENST00000542033 CRBNQ96SW2 442 aa5.14□□□□□ -1.59
USP28-210ENST00000542033 GMIPQ9P107 970 aa5.14□□□□□ -1.59
USP28-210ENST00000542033 OAS3Q9Y6K5 1087 aaKnown RBP5.14□□□□□ -1.59
USP28-210ENST00000542033 UPK3BL1B0FP48 263 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 CHURC1-FNTBB4DL54 471 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 UPK3BL2E5RIL1 263 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 ADAMTS4O75173 837 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 RAG1P15918 1043 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 SOX9P48436 509 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 NASPP49321 788 aaPredicted RBP5.13□□□□□ -1.59
USP28-210ENST00000542033 ZC3H6P61129 1189 aaKnown RBP5.13□□□□□ -1.59
USP28-210ENST00000542033 ARSHQ5FYA8 562 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 ANGEL2Q5VTE6 544 aaKnown RBP5.13□□□□□ -1.59
USP28-210ENST00000542033 CDH24Q86UP0 819 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 SPACA3Q8IXA5 215 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 SEC16BQ96JE7 1060 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 CCDC74BQ96LY2 380 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 PAK6Q9NQU5 681 aaPredicted RBP5.13□□□□□ -1.59
USP28-210ENST00000542033 ZNRF3Q9ULT6 936 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 PPT2Q9UMR5 302 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 PLAGL2Q9UPG8 496 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 CEP131Q9UPN4 1083 aa5.13□□□□□ -1.59
USP28-210ENST00000542033 SLC22A31A6NKX4 558 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 CBX7O95931 251 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 GBP1P32455 592 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 PLCL1Q15111 1095 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 OVOS1Q6IE37 1185 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 RIN3Q8TB24 985 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 PIWIL2Q8TC59 973 aaKnown RBP5.12□□□□□ -1.59
USP28-210ENST00000542033 TMEM40Q8WWA1 233 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 KCNH3Q9ULD8 1083 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 U3KQE9 123 aa5.12□□□□□ -1.59
USP28-210ENST00000542033 DNAJA2O60884 412 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 EIF6P56537 245 aaKnown RBP5.11□□□□□ -1.59
USP28-210ENST00000542033 ARID5AQ03989 594 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 BNIP3Q12983 259 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 NKPD1Q17RQ9 610 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 CCDC81Q6ZN84 652 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 NLRC3Q7RTR2 1065 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 THAP5Q7Z6K1 395 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 ABI1Q8IZP0 508 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 DNAJB8Q8NHS0 232 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 ATG4CQ96DT6 458 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 KIF2CQ99661 725 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 TINF2Q9BSI4 451 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
USP28-210ENST00000542033 ANTXR1Q9H6X2 564 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 STRIP2Q9ULQ0 834 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 CAPN6Q9Y6Q1 641 aa5.11□□□□□ -1.59
USP28-210ENST00000542033 MEIS3P2A8K0S8 358 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 SSBP05455 408 aaKnown RBP eCLIP5.1□□□□□ -1.59
USP28-210ENST00000542033 CD8BP10966 210 aa5.1□□□□□ -1.59
USP28-210ENST00000542033 ATF4P18848 351 aaPredicted RBP5.1□□□□□ -1.59
USP28-210ENST00000542033 FUT4P22083 530 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms