RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 POLA2Q14181 598 aa23.12■■□□□ 1.29
RAP1B-227ENST00000542018 ZYXQ15942 572 aaKnown RBP23.12■■□□□ 1.29
RAP1B-227ENST00000542018 FAM109BQ6ICB4 259 aaPredicted RBP23.12■■□□□ 1.29
RAP1B-227ENST00000542018 CCAR1Q8IX12 1150 aaKnown RBP23.12■■□□□ 1.29
RAP1B-227ENST00000542018 NPLOC4Q8TAT6 608 aa23.12■■□□□ 1.29
RAP1B-227ENST00000542018 BTBD7Q9P203 1132 aa23.12■■□□□ 1.29
RAP1B-227ENST00000542018 RLFQ13129 1914 aa23.12■■□□□ 1.29
RAP1B-227ENST00000542018 SPTBN5Q9NRC6 3674 aaKnown RBP23.11■■□□□ 1.29
RAP1B-227ENST00000542018 PTPREP23469 700 aa23.11■■□□□ 1.29
RAP1B-227ENST00000542018 CATSPERGQ6ZRH7 1159 aa23.11■■□□□ 1.29
RAP1B-227ENST00000542018 ACER1Q8TDN7 264 aa23.11■■□□□ 1.29
RAP1B-227ENST00000542018 ZNF512BQ96KM6 892 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-227ENST00000542018 TRIM34Q9BYJ4 488 aa23.11■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L15C9J2P7 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L13C9JLJ4 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L11C9JVI0 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L18D6R9N7 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L22D6RA61 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L17D6RBQ6 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L19D6RCP7 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L20D6RJB6 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 HOXC6P09630 235 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 USP17L24Q0WX57 530 aa23.1■■□□□ 1.29
RAP1B-227ENST00000542018 TLR7Q9NYK1 1049 aaKnown RBP23.1■■□□□ 1.29
RAP1B-227ENST00000542018 DDX20Q9UHI6 824 aaKnown RBP23.1■■□□□ 1.29
RAP1B-227ENST00000542018 SLC15A5A6NIM6 579 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 HLA-DOAP06340 250 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 VCAM1P19320 739 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 GRB14Q14449 540 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 CCDC158Q5M9N0 1113 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 LBX2Q6XYB7 198 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.09■■□□□ 1.29
RAP1B-227ENST00000542018 FAM161BQ96MY7 647 aa23.09■■□□□ 1.29
RAP1B-227ENST00000542018 DBNLQ9UJU6 430 aaKnown RBP23.09■■□□□ 1.29
RAP1B-227ENST00000542018 BCAR3O75815 825 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 CYP7A1P22680 504 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 CYP2C19P33261 490 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 GUCY1A2P33402 732 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 ATN1P54259 1190 aaPredicted RBP23.08■■□□□ 1.29
RAP1B-227ENST00000542018 MFSD14CQ5VZR4 134 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 ATF7IPQ6VMQ6 1270 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 MIGA1Q8NAN2 632 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 LPAR1Q92633 364 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 KIAA1683Q9H0B3 1180 aa23.08■■□□□ 1.29
RAP1B-227ENST00000542018 SPDYE16A6NNV3 312 aaPredicted RBP23.07■■□□□ 1.28
RAP1B-227ENST00000542018 CCNA1P78396 465 aa23.07■■□□□ 1.28
RAP1B-227ENST00000542018 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
RAP1B-227ENST00000542018 EHD4Q9H223 541 aa23.07■■□□□ 1.28
RAP1B-227ENST00000542018 DNM1LO00429 736 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 IGSF3O75054 1194 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 CYBAP13498 195 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 RAB3GAP1Q15042 981 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 WDR78Q5VTH9 848 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 FEZ1Q99689 392 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 CWC22Q9HCG8 908 aaKnown RBP23.06■■□□□ 1.28
RAP1B-227ENST00000542018 SERPINB13Q9UIV8 391 aa23.06■■□□□ 1.28
RAP1B-227ENST00000542018 ZNF236Q9UL36 1845 aa23.05■■□□□ 1.28
RAP1B-227ENST00000542018 GLRX3O76003 335 aaKnown RBP23.05■■□□□ 1.28
RAP1B-227ENST00000542018 CNGA1P29973 690 aa23.05■■□□□ 1.28
RAP1B-227ENST00000542018 SHMT1P34896 483 aa23.05■■□□□ 1.28
RAP1B-227ENST00000542018 RTP1P59025 263 aa23.05■■□□□ 1.28
RAP1B-227ENST00000542018 ATP2B2Q01814 1243 aa23.05■■□□□ 1.28
RAP1B-227ENST00000542018 LBHD1Q9BQE6 289 aaPredicted RBP23.05■■□□□ 1.28
RAP1B-227ENST00000542018 MSCO60682 206 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 PLCD1P51178 756 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 USP14P54578 494 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 ATP8B2P98198 1209 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 EVX2Q03828 476 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
RAP1B-227ENST00000542018 TMEM57Q8N5G2 664 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 RPAP3Q9H6T3 665 aaPredicted RBP23.04■■□□□ 1.28
RAP1B-227ENST00000542018 ANTXR1Q9H6X2 564 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 A0A0G2JMZ2 1700 aa23.04■■□□□ 1.28
RAP1B-227ENST00000542018 CCER2I3L3R5 266 aa23.03■■□□□ 1.28
RAP1B-227ENST00000542018 IPO8O15397 1037 aaKnown RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 IDH1O75874 414 aaKnown RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 SHHQ15465 462 aa23.03■■□□□ 1.28
RAP1B-227ENST00000542018 ABCB5Q2M3G0 1257 aa23.03■■□□□ 1.28
RAP1B-227ENST00000542018 C9orf50Q5SZB4 431 aa23.03■■□□□ 1.28
RAP1B-227ENST00000542018 GJC2Q5T442 439 aaPredicted RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 MAGEB6Q8N7X4 407 aa23.03■■□□□ 1.28
RAP1B-227ENST00000542018 FRAT1Q92837 279 aaPredicted RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 EAF2Q96CJ1 260 aaPredicted RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 CCDC8Q9H0W5 538 aaPredicted RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 NOP58Q9Y2X3 529 aaKnown RBP23.03■■□□□ 1.28
RAP1B-227ENST00000542018 A0A1W2PRG0 241 aa23.02■■□□□ 1.28
RAP1B-227ENST00000542018 SURF6O75683 361 aaKnown RBP23.02■■□□□ 1.28
RAP1B-227ENST00000542018 USP5P45974 858 aa23.02■■□□□ 1.28
RAP1B-227ENST00000542018 MIER1Q8N108 512 aa23.02■■□□□ 1.28
RAP1B-227ENST00000542018 C1orf115Q9H7X2 142 aa23.02■■□□□ 1.28
RAP1B-227ENST00000542018 GABPAQ06546 454 aa23.01■■□□□ 1.27
RAP1B-227ENST00000542018 OS9Q13438 667 aaPredicted RBP23.01■■□□□ 1.27
RAP1B-227ENST00000542018 ANO1Q5XXA6 986 aa23.01■■□□□ 1.27
RAP1B-227ENST00000542018 SLC39A5Q6ZMH5 540 aa23.01■■□□□ 1.27
RAP1B-227ENST00000542018 RIOK1Q9BRS2 568 aaKnown RBP23.01■■□□□ 1.27
RAP1B-227ENST00000542018 MOV10L1Q9BXT6 1211 aaKnown RBP23.01■■□□□ 1.27
RAP1B-227ENST00000542018 ATP11BQ9Y2G3 1177 aa23.01■■□□□ 1.27
RAP1B-227ENST00000542018 IVNS1ABPQ9Y6Y0 642 aa23.01■■□□□ 1.27
RAP1B-227ENST00000542018 COBLO75128 1261 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms