RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 IQCB1Q15051 598 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 USP17L1Q7RTZ2 530 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 KCNG4Q8TDN1 519 aa16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 FOXP1Q9H334 677 aaPredicted RBP16.92■□□□□ 0.3
SPOCK3-226ENST00000541354 MYH6P13533 1939 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 ZNF165P49910 485 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 DACT2Q5SW24 774 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 KCNF1Q9H3M0 494 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 GOLPH3LQ9H4A5 285 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 FUT2Q10981 343 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 KRT40Q6A162 431 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 CTCFLQ8NI51 663 aaPredicted RBP16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
SPOCK3-226ENST00000541354 GREB1LQ9C091 1923 aaPredicted RBP16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 DYNC1I1O14576 645 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 ECE2O60344 883 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 ZNF75DP51815 510 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 CCDC73Q6ZRK6 1079 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 LINC00301Q8NCQ3 95 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 TTF2Q9UNY4 1162 aaKnown RBP16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 STX1AQ16623 288 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 MYSM1Q5VVJ2 828 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 FMR1NBQ8N0W7 255 aaPredicted RBP16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 ZNF830Q96NB3 372 aaPredicted RBP16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 JAG2Q9Y219 1238 aa16.9■□□□□ 0.3
SPOCK3-226ENST00000541354 CYP2D6P10635 497 aa16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 RASA1P20936 1047 aa16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 AKAP17AQ02040 695 aaKnown RBP16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 GABPAQ06546 454 aa16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 SLC26A6Q9BXS9 759 aa16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 SH3GLB2Q9NR46 395 aa16.89■□□□□ 0.3
SPOCK3-226ENST00000541354 MMP1P03956 469 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 CDK8P49336 464 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 TFAP4Q01664 338 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 GRM4Q14833 912 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 MAPKAPK5Q8IW41 473 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 ZKSCAN3Q9BRR0 538 aa16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPOCK3-226ENST00000541354 BRCA1P38398 1863 aaKnown RBP16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 JMYQ8N9B5 988 aa16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 MRPS27Q92552 414 aaKnown RBP16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 DNAJC25Q9H1X3 360 aa16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 KINO60870 393 aaKnown RBP16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 TSPY3P0CV98 308 aa16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 TSPY8P0CW00 308 aa16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 CHRNA5P30532 468 aa16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 GTF2F1P35269 517 aaKnown RBP eCLIP16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 CRKP46108 304 aa16.88■□□□□ 0.29
SPOCK3-226ENST00000541354 MYH8P13535 1937 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 PPP6R2O75170 966 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 WDHD1O75717 1129 aaPredicted RBP16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 SCN9AQ15858 1988 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 ANO10Q9NW15 660 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 CCDC17Q96LX7 622 aa16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
SPOCK3-226ENST00000541354 UQCRHLA0A096LP55 91 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 UQCRHP07919 91 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 ME1P48163 572 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 MTFR1LQ9H019 292 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 USP40Q9NVE5 1235 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 CNTNAP5Q8WYK1 1306 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 RILPL1Q5EBL4 403 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 GALNT17Q6IS24 598 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 PHKBQ93100 1093 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 BPIFA3Q9BQP9 254 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
SPOCK3-226ENST00000541354 ENTPD3O75355 529 aa16.85■□□□□ 0.29
SPOCK3-226ENST00000541354 PRDM1O75626 825 aa16.85■□□□□ 0.29
SPOCK3-226ENST00000541354 BMP15O95972 392 aa16.85■□□□□ 0.29
SPOCK3-226ENST00000541354 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
SPOCK3-226ENST00000541354 PLCD1P51178 756 aa16.85■□□□□ 0.29
SPOCK3-226ENST00000541354 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
SPOCK3-226ENST00000541354 GUCY1B3Q02153 619 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms