RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 MKNK2Q9HBH9 465 aa23.92■■□□□ 1.42
RAP1B-223ENST00000541167 GREB1LQ9C091 1923 aaPredicted RBP23.91■■□□□ 1.42
RAP1B-223ENST00000541167 TLR2O60603 784 aa23.91■■□□□ 1.42
RAP1B-223ENST00000541167 SLC3A2P08195 630 aaKnown RBP23.91■■□□□ 1.42
RAP1B-223ENST00000541167 SKAP1Q86WV1 359 aa23.91■■□□□ 1.42
RAP1B-223ENST00000541167 ZNF287Q9HBT7 754 aa23.91■■□□□ 1.42
RAP1B-223ENST00000541167 SLC45A1Q9Y2W3 748 aa23.91■■□□□ 1.42
RAP1B-223ENST00000541167 CYP2C8P10632 490 aa23.9■■□□□ 1.42
RAP1B-223ENST00000541167 HSPD1P10809 573 aaKnown RBP23.9■■□□□ 1.42
RAP1B-223ENST00000541167 ZYXQ15942 572 aaKnown RBP23.9■■□□□ 1.42
RAP1B-223ENST00000541167 USP17L2Q6R6M4 530 aa23.9■■□□□ 1.42
RAP1B-223ENST00000541167 ACER1Q8TDN7 264 aa23.9■■□□□ 1.42
RAP1B-223ENST00000541167 RASA1P20936 1047 aa23.89■■□□□ 1.41
RAP1B-223ENST00000541167 SP3Q02447 781 aa23.89■■□□□ 1.41
RAP1B-223ENST00000541167 PABPC4Q13310 644 aaKnown RBP eCLIP23.89■■□□□ 1.41
RAP1B-223ENST00000541167 ALX1Q15699 326 aa23.89■■□□□ 1.41
RAP1B-223ENST00000541167 PNMA3Q9UL41 463 aa23.89■■□□□ 1.41
RAP1B-223ENST00000541167 PRDM1O75626 825 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 USP14P54578 494 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 ICA1Q05084 483 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 PDE4BQ07343 736 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 CLEC10AQ8IUN9 316 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 ERO1AQ96HE7 468 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 CPA4Q9UI42 421 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 LAMA4Q16363 1823 aa23.88■■□□□ 1.41
RAP1B-223ENST00000541167 ADGRA2Q96PE1 1338 aa23.87■■□□□ 1.41
RAP1B-223ENST00000541167 OSBPP22059 807 aa23.87■■□□□ 1.41
RAP1B-223ENST00000541167 CTU1Q7Z7A3 348 aaKnown RBP23.87■■□□□ 1.41
RAP1B-223ENST00000541167 SMCR8Q8TEV9 937 aaPredicted RBP23.87■■□□□ 1.41
RAP1B-223ENST00000541167 KIAA1683Q9H0B3 1180 aa23.87■■□□□ 1.41
RAP1B-223ENST00000541167 ARHGEF10LQ9HCE6 1279 aa23.87■■□□□ 1.41
RAP1B-223ENST00000541167 EMILIN3Q9NT22 766 aa23.87■■□□□ 1.41
RAP1B-223ENST00000541167 ZMYM6O95789 1325 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 FGAP02671 866 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 CTDSPL2Q05D32 466 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 ERICH6BQ5W0A0 696 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 ZNF444Q8N0Y2 327 aaPredicted RBP23.86■■□□□ 1.41
RAP1B-223ENST00000541167 CD99L2Q8TCZ2 262 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 C12orf42Q96LP6 360 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 ZSWIM8A7E2V4 1837 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 MYH4Q9Y623 1939 aa23.86■■□□□ 1.41
RAP1B-223ENST00000541167 RAD50Q92878 1312 aa23.85■■□□□ 1.41
RAP1B-223ENST00000541167 A0A1W2PRG0 241 aa23.85■■□□□ 1.41
RAP1B-223ENST00000541167 CHMLP26374 656 aa23.85■■□□□ 1.41
RAP1B-223ENST00000541167 IRX3P78415 501 aaPredicted RBP23.85■■□□□ 1.41
RAP1B-223ENST00000541167 C17orf99Q6UX52 265 aa23.85■■□□□ 1.41
RAP1B-223ENST00000541167 RUFY2Q8WXA3 655 aa23.85■■□□□ 1.41
RAP1B-223ENST00000541167 ABHD8Q96I13 439 aa23.85■■□□□ 1.41
RAP1B-223ENST00000541167 ATP2B2Q01814 1243 aa23.84■■□□□ 1.41
RAP1B-223ENST00000541167 MCOLN1Q9GZU1 580 aa23.84■■□□□ 1.41
RAP1B-223ENST00000541167 ASCC2Q9H1I8 757 aaPredicted RBP23.84■■□□□ 1.41
RAP1B-223ENST00000541167 SH2D4AQ9H788 454 aa23.84■■□□□ 1.41
RAP1B-223ENST00000541167 KANSL2Q9H9L4 492 aa23.84■■□□□ 1.41
RAP1B-223ENST00000541167 PPP4R2Q9NY27 417 aa23.84■■□□□ 1.41
RAP1B-223ENST00000541167 ANAPC4Q9UJX5 808 aa23.84■■□□□ 1.41
RAP1B-223ENST00000541167 MGAMO43451 1857 aa23.83■■□□□ 1.41
RAP1B-223ENST00000541167 HOXA7P31268 230 aaPredicted RBP23.83■■□□□ 1.41
RAP1B-223ENST00000541167 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.83■■□□□ 1.41
RAP1B-223ENST00000541167 IL25Q9H293 177 aa23.83■■□□□ 1.41
RAP1B-223ENST00000541167 PCDH10Q9P2E7 1040 aa23.83■■□□□ 1.41
RAP1B-223ENST00000541167 TSPY3P0CV98 308 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 TSPY8P0CW00 308 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 BCRP11274 1271 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 EEF2P13639 858 aaKnown RBP23.82■■□□□ 1.4
RAP1B-223ENST00000541167 VCAM1P19320 739 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 HAND2P61296 217 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 KIF22Q14807 665 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 SIAH1Q8IUQ4 282 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 DSCC1Q9BVC3 393 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.82■■□□□ 1.47e-8■■■■■ 45.5
RAP1B-223ENST00000541167 TMX2Q9Y320 296 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 TRIM17Q9Y577 477 aa23.82■■□□□ 1.4
RAP1B-223ENST00000541167 ECM2O94769 699 aaPredicted RBP23.81■■□□□ 1.4
RAP1B-223ENST00000541167 LACTBP83111 547 aaPredicted RBP23.81■■□□□ 1.4
RAP1B-223ENST00000541167 BMP2KLQ5H9B9 411 aa23.81■■□□□ 1.4
RAP1B-223ENST00000541167 FAM47AQ5JRC9 791 aa23.81■■□□□ 1.4
RAP1B-223ENST00000541167 PLIN4Q96Q06 1357 aa23.8■■□□□ 1.4
RAP1B-223ENST00000541167 TFAP4Q01664 338 aa23.8■■□□□ 1.4
RAP1B-223ENST00000541167 EFCC1Q9HA90 598 aa23.8■■□□□ 1.4
RAP1B-223ENST00000541167 INCENPQ9NQS7 918 aa23.8■■□□□ 1.4
RAP1B-223ENST00000541167 TOMM22Q9NS69 142 aa23.8■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L15C9J2P7 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L13C9JLJ4 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L11C9JVI0 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L18D6R9N7 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L22D6RA61 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L17D6RBQ6 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L19D6RCP7 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L20D6RJB6 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 GCLCP48506 637 aaPredicted RBP23.79■■□□□ 1.4
RAP1B-223ENST00000541167 USP17L24Q0WX57 530 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 ARHGEF6Q15052 776 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 OTOP1Q7RTM1 612 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 ANKRD13CQ8N6S4 541 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 NEDD1Q8NHV4 660 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 ARHGAP39Q9C0H5 1083 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 RPAP3Q9H6T3 665 aaPredicted RBP23.79■■□□□ 1.4
RAP1B-223ENST00000541167 VCPKMTQ9H867 229 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 TACC3Q9Y6A5 838 aa23.79■■□□□ 1.4
RAP1B-223ENST00000541167 IGKV6D-41A0A0C4DH26 115 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms