RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 CPSF3Q9UKF6 684 aaKnown RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 PLCD1P51178 756 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 IQCB1Q15051 598 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SPECC1L-ADORA2AF8WAN1 911 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 NVLO15381 856 aaKnown RBP11.07□□□□□ -0.64
TRERF1-205ENST00000541110 OCM2P0CE71 109 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 OCMP0CE72 109 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-205ENST00000541110 TMOD1P28289 359 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 GNPTABQ3T906 1256 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 MMEL1Q495T6 779 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 CTAGE3PQ8IX95 158 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 FAM76AQ8TAV0 307 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 TEKT1Q969V4 418 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SUGCTQ9HAC7 445 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 TCP10L2B9ZVM9 353 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 LRRC59Q96AG4 307 aaKnown RBP11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SLITRK6Q9H5Y7 841 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SYNDIG1Q9H7V2 258 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 CTTNBP2NLQ9P2B4 639 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 CAVIN2O95810 425 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 LIG4P49917 911 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 ZBTB8OSQ8IWT0 167 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 NUB1Q9Y5A7 615 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 CCDC105Q8IYK2 499 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 ALKBH8Q96BT7 664 aaKnown RBP11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SNAPC4Q5SXM2 1469 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 TBCCQ15814 346 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 ZSCAN23Q3MJ62 389 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 CXorf38Q8TB03 319 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 SDCCAG3Q96C92 435 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 USP21Q9UK80 565 aa11.07□□□□□ -0.64
TRERF1-205ENST00000541110 TLR3O15455 904 aaKnown RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 MYSM1Q5VVJ2 828 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 DYMQ7RTS9 669 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 VPS37BQ9H9H4 285 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 EIF4G3O43432 1585 aaKnown RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 BNIP3LO60238 219 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 SZRD1Q7Z422 152 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 MTRQ99707 1265 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 MAP3K7O43318 606 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 MX2P20592 715 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 DNM1Q05193 864 aaKnown RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 TBC1D8BQ0IIM8 1120 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 KAZNQ674X7 775 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 DISC1Q9NRI5 854 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 IFNKQ9P0W0 207 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 BUB1BO60566 1050 aaPredicted RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 LMNB1P20700 586 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 METTL23Q86XA0 190 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 PGBD1Q96JS3 809 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 GAS7O60861 476 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 TRIM27P14373 513 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 ATP6V1E2Q96A05 226 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 HAUS1Q96CS2 278 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 BICC1Q9H694 974 aaKnown RBP11.06□□□□□ -0.64
TRERF1-205ENST00000541110 NCKAP5LQ9HCH0 1330 aa11.06□□□□□ -0.64
TRERF1-205ENST00000541110 PTPREP23469 700 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 AKAP4Q5JQC9 854 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 KSR1Q8IVT5 923 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 MMTAG2Q9BU76 263 aaKnown RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 B4E1Z4 1266 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ADCY7P51828 1080 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 PLCB1Q9NQ66 1216 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 FBLN1P23142 703 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 POLGP54098 1239 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 FAM95CA0A1B0GW59 222 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 RSRC2Q7L4I2 434 aaKnown RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ZHX1Q9UKY1 873 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ALAS1P13196 640 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ZNF18P17022 549 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 PHEXP78562 749 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 NBPF11Q86T75 865 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 SLC13A4Q9UKG4 626 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ADGRL1O94910 1474 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ZSCAN20P17040 1043 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 TNFAIP1Q13829 316 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 BRD3Q15059 726 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 TTC31Q49AM3 519 aaPredicted RBP11.05□□□□□ -0.64
TRERF1-205ENST00000541110 KRT222Q8N1A0 295 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ARHGAP24Q8N264 748 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 CDC26Q8NHZ8 85 aa11.05□□□□□ -0.64
TRERF1-205ENST00000541110 ITGA6P23229 1130 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms