RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 PFASO15067 1338 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 XRCC5P13010 732 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 SHMT1P34896 483 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 PLEKHH3Q7Z736 793 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 SOCS4Q8WXH5 440 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 FEZ1Q99689 392 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 GDF15Q99988 308 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 RIOK1Q9BRS2 568 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 SERPINB13Q9UIV8 391 aa17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-222ENST00000540183 ABCB5Q2M3G0 1257 aa17.34■□□□□ 0.37
SEMA4D-222ENST00000540183 CERKLQ49MI3 558 aaPredicted RBP17.34■□□□□ 0.37
SEMA4D-222ENST00000540183 CCAR1Q8IX12 1150 aaKnown RBP17.34■□□□□ 0.37
SEMA4D-222ENST00000540183 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
SEMA4D-222ENST00000540183 EHD4Q9H223 541 aa17.34■□□□□ 0.37
SEMA4D-222ENST00000540183 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
SEMA4D-222ENST00000540183 A0A0G2JMZ2 1700 aa17.33■□□□□ 0.37
SEMA4D-222ENST00000540183 A0A1W2PPC1 479 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L15C9J2P7 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L13C9JLJ4 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L11C9JVI0 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L18D6R9N7 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L22D6RA61 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L17D6RBQ6 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L19D6RCP7 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L20D6RJB6 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 APBB1O00213 710 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 VCAM1P19320 739 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 RGS2P41220 211 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 USP17L24Q0WX57 530 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 LHX8Q68G74 356 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 CATSPERGQ6ZRH7 1159 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 MIER1Q8N108 512 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 APBA2Q99767 749 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
SEMA4D-222ENST00000540183 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 IGSF3O75054 1194 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 MAGEA10P43363 369 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 MAP2K5Q13163 448 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 SEPT2Q15019 361 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 SLFNL1Q499Z3 407 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 GTF3C2Q8WUA4 911 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 EDC3Q96F86 508 aaKnown RBP17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 RABGAP1Q9Y3P9 1069 aa17.32■□□□□ 0.36
SEMA4D-222ENST00000540183 CYP2D6P10635 497 aa17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 COL6A1P12109 1028 aa17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 PDE6AP16499 860 aa17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 RHPN1Q8TCX5 695 aa17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 KIAA1683Q9H0B3 1180 aa17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 RPAP3Q9H6T3 665 aaPredicted RBP17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 CWC22Q9HCG8 908 aaKnown RBP17.31■□□□□ 0.36
SEMA4D-222ENST00000540183 A0A1W2PRG0 241 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 SPDYE16A6NNV3 312 aaPredicted RBP17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 BMP8BP34820 402 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 GABPAQ06546 454 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 TRMT44Q8IYL2 757 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 NPLOC4Q8TAT6 608 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 DNAJC2Q99543 621 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 ZNF236Q9UL36 1845 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
SEMA4D-222ENST00000540183 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 ZNF532Q9HCE3 1301 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 GOLIM4O00461 696 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 PTPREP23469 700 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 USP14P54578 494 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 SLC9C2Q5TAH2 1124 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 CLEC10AQ8IUN9 316 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 LCORLQ8N3X6 602 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
SEMA4D-222ENST00000540183 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
SEMA4D-222ENST00000540183 CHGBP05060 677 aa17.28■□□□□ 0.36
SEMA4D-222ENST00000540183 Q7L0L9 218 aa17.28■□□□□ 0.36
SEMA4D-222ENST00000540183 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
SEMA4D-222ENST00000540183 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
SEMA4D-222ENST00000540183 TRPV1Q8NER1 839 aa17.28■□□□□ 0.36
SEMA4D-222ENST00000540183 SLC15A5A6NIM6 579 aa17.27■□□□□ 0.36
SEMA4D-222ENST00000540183 CYP2C19P33261 490 aa17.27■□□□□ 0.36
SEMA4D-222ENST00000540183 CCNA1P78396 465 aa17.27■□□□□ 0.36
SEMA4D-222ENST00000540183 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
SEMA4D-222ENST00000540183 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.36
SEMA4D-222ENST00000540183 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.36
SEMA4D-222ENST00000540183 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms