RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 LRWD1Q9UFC0 647 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 SERPINA10Q9UK55 444 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CTDSPL2Q05D32 466 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 TTC31Q49AM3 519 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 LGSNQ5TDP6 509 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 NSMCE1Q8WV22 266 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 H7C1D1 291 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 M0QZ92 97 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 GIGYF1O75420 1035 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 CRCPO75575 148 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ATP11AP98196 1134 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 NIM1KQ8IY84 436 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 REXO1Q8N1G1 1221 aaKnown RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 GPATCH11Q8N954 259 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 NOD1Q9Y239 953 aa7.2□□□□□ -1.26
LSAMP-207ENST00000539563 TARBP1Q13395 1621 aaKnown RBP7.2□□□□□ -1.26
LSAMP-207ENST00000539563 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 ZWINTO95229 277 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 VIMP08670 466 aaKnown RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 HARSP12081 509 aaKnown RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 CPA1P15085 419 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GRM1Q13255 1194 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 LARGE2Q8N3Y3 721 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GOLGA5Q8TBA6 731 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PNMA6EA0A0J9YXQ4 647 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GTF2A1P52655 376 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 TPD52P55327 224 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 CFAP221Q4G0U5 840 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 SFMBT2Q5VUG0 894 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PLEKHG3A1L390 1219 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GIPC1O14908 333 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PRPF6O94906 941 aaKnown RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 NLRX1Q86UT6 975 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 TGFBRAP1Q8WUH2 860 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 RAB17Q9H0T7 212 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 NCOA5Q9HCD5 579 aaKnown RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 TTC37Q6PGP7 1564 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PREX2Q70Z35 1606 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 SH3BP5O60239 455 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 TAF5LO75529 589 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 TFAP4Q01664 338 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 UAP1Q16222 522 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 STMN2Q93045 179 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PHKBQ93100 1093 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 SLC5A4Q9NY91 659 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 CD2APQ9Y5K6 639 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 ERBB4Q15303 1308 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GOLGA6CA6NDK9 693 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GOLGA6BA6NDN3 693 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GOLGA6DP0CG33 693 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 DLGAP5Q15398 846 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 PPP2R5EQ16537 467 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 USH1GQ495M9 461 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 HAUS7Q99871 368 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GOLGA6AQ9NYA3 693 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 MAPK8IP1Q9UQF2 711 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 MED23Q9ULK4 1368 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 ADALQ6DHV7 355 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 GTF3C6Q969F1 213 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 RBSNQ9H1K0 784 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 BIN2Q9UBW5 565 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-207ENST00000539563 ZMYM6O95789 1325 aa7.19□□□□□ -1.26
LSAMP-207ENST00000539563 CCDC160A6NGH7 325 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 MTMR3Q13615 1198 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 DCUN1D2Q6PH85 259 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 KDM5CP41229 1560 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 TNFAIP1Q13829 316 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 GNPTABQ3T906 1256 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 RPGRIP1Q96KN7 1286 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 CARD10Q9BWT7 1032 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 MAGEA1P43355 309 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 RBM6P78332 1123 aaKnown RBP7.18□□□□□ -1.26
LSAMP-207ENST00000539563 PAK2Q13177 524 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 GEN1Q17RS7 908 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 WWC3Q9ULE0 1092 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 ATP7BP35670 1465 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 PPARAQ07869 468 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 KLHL30Q0D2K2 578 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 KRT40Q6A162 431 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 PCDHB13Q9Y5F0 798 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 SMCO2A6NFE2 343 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 N4BP1O75113 896 aaKnown RBP7.18□□□□□ -1.26
LSAMP-207ENST00000539563 KIF11P52732 1056 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 UTP14CQ5TAP6 766 aaKnown RBP7.18□□□□□ -1.26
LSAMP-207ENST00000539563 MRPL11Q9Y3B7 192 aaKnown RBP7.18□□□□□ -1.26
LSAMP-207ENST00000539563 EXOC3O60645 756 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 CNGA1P29973 690 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 RPS6KA1Q15418 735 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 PPP1R21Q6ZMI0 780 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 KRT26Q7Z3Y9 468 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 H0YCG3 227 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 GBP1P32455 592 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 RPS8P62241 208 aaKnown RBP7.18□□□□□ -1.26
LSAMP-207ENST00000539563 PPFIBP2Q8ND30 876 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 ORAI2Q96SN7 254 aa7.18□□□□□ -1.26
LSAMP-207ENST00000539563 RIOK1Q9BRS2 568 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms